1aop

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[[Image:1aop.jpg|left|200px]]
[[Image:1aop.jpg|left|200px]]
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{{Structure
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<!--
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|PDB= 1aop |SIZE=350|CAPTION= <scene name='initialview01'>1aop</scene>, resolution 1.60&Aring;
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The line below this paragraph, containing "STRUCTURE_1aop", creates the "Structure Box" on the page.
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|SITE= <scene name='pdbsite=ACT:Four+Active+Site+Residues+That+Contact+The+Bound+Phosphate'>ACT</scene> and <scene name='pdbsite=BRG:CYS+Thiolate+In+The+Active+Center+That+Bridges+The+Heme+...'>BRG</scene>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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|LIGAND= <scene name='pdbligand=K:POTASSIUM+ION'>K</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene>, <scene name='pdbligand=SF4:IRON/SULFUR+CLUSTER'>SF4</scene>, <scene name='pdbligand=SRM:SIROHEME'>SRM</scene>
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Sulfite_reductase_(NADPH) Sulfite reductase (NADPH)], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.8.1.2 1.8.1.2] </span>
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or leave the SCENE parameter empty for the default display.
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|GENE= CYSIJ ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=562 Escherichia coli])
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-->
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|DOMAIN=
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{{STRUCTURE_1aop| PDB=1aop | SCENE= }}
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|RELATEDENTRY=
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|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1aop FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1aop OCA], [http://www.ebi.ac.uk/pdbsum/1aop PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1aop RCSB]</span>
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}}
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'''SULFITE REDUCTASE STRUCTURE AT 1.6 ANGSTROM RESOLUTION'''
'''SULFITE REDUCTASE STRUCTURE AT 1.6 ANGSTROM RESOLUTION'''
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==About this Structure==
==About this Structure==
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1AOP is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. This structure supersedes the now removed PDB entry 1GEO. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1AOP OCA].
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1AOP is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=1geo 1geo]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1AOP OCA].
==Reference==
==Reference==
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[[Category: Escherichia coli]]
[[Category: Escherichia coli]]
[[Category: Single protein]]
[[Category: Single protein]]
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[[Category: Sulfite reductase (NADPH)]]
 
[[Category: Crane, B R.]]
[[Category: Crane, B R.]]
[[Category: Getzoff, E D.]]
[[Category: Getzoff, E D.]]
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[[Category: [4fe-4s]]]
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[[Category: Oxidoreductase]]
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[[Category: oxidoreductase]]
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[[Category: Phosphate complex]]
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[[Category: phosphate complex]]
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[[Category: Siroheme]]
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[[Category: siroheme]]
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[[Category: Six-electron reduction]]
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[[Category: six-electron reduction]]
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[[Category: Snirr]]
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[[Category: snirr]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Fri May 2 10:31:24 2008''
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Mar 30 18:44:37 2008''
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Revision as of 07:31, 2 May 2008

Template:STRUCTURE 1aop

SULFITE REDUCTASE STRUCTURE AT 1.6 ANGSTROM RESOLUTION


Overview

Fundamental chemical transformations for biogeochemical cycling of sulfur and nitrogen are catalyzed by sulfite and nitrite reductases. The crystallographic structure of Escherichia coli sulfite reductase hemoprotein (SiRHP), which catalyzes the concerted six-electron reductions of sulfite to sulfide and nitrite to ammonia, was solved with multiwavelength anomalous diffraction (MAD) of the native siroheme and Fe4S4 cluster cofactors, multiple isomorphous replacement, and selenomethionine sequence markers. Twofold symmetry within the 64-kilodalton polypeptide generates a distinctive three-domain alpha/beta fold that controls cofactor assembly and reactivity. Homology regions conserved between the symmetry-related halves of SiRHP and among other sulfite and nitrite reductases revealed key residues for stability and function, and identified a sulfite or nitrite reductase repeat (SNiRR) common to a redox-enzyme superfamily. The saddle-shaped siroheme shares a cysteine thiolate ligand with the Fe4S4 cluster and ligates an unexpected phosphate anion. In the substrate complex, sulfite displaces phosphate and binds to siroheme iron through sulfur. An extensive hydrogen-bonding network of positive side chains, water molecules, and siroheme carboxylates activates S-O bonds for reductive cleavage.

About this Structure

1AOP is a Single protein structure of sequence from Escherichia coli. This structure supersedes the now removed PDB entry 1geo. Full crystallographic information is available from OCA.

Reference

Sulfite reductase structure at 1.6 A: evolution and catalysis for reduction of inorganic anions., Crane BR, Siegel LM, Getzoff ED, Science. 1995 Oct 6;270(5233):59-67. PMID:7569952 Page seeded by OCA on Fri May 2 10:31:24 2008

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