1b5m

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
[[Image:1b5m.jpg|left|200px]]
[[Image:1b5m.jpg|left|200px]]
-
{{Structure
+
<!--
-
|PDB= 1b5m |SIZE=350|CAPTION= <scene name='initialview01'>1b5m</scene>, resolution 2.7&Aring;
+
The line below this paragraph, containing "STRUCTURE_1b5m", creates the "Structure Box" on the page.
-
|SITE=
+
You may change the PDB parameter (which sets the PDB file loaded into the applet)
-
|LIGAND= <scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>
+
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
-
|ACTIVITY=
+
or leave the SCENE parameter empty for the default display.
-
|GENE=
+
-->
-
|DOMAIN=
+
{{STRUCTURE_1b5m| PDB=1b5m | SCENE= }}
-
|RELATEDENTRY=
+
-
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1b5m FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1b5m OCA], [http://www.ebi.ac.uk/pdbsum/1b5m PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1b5m RCSB]</span>
+
-
}}
+
'''RAT OUTER MITOCHONDRIAL MEMBRANE CYTOCHROME B5'''
'''RAT OUTER MITOCHONDRIAL MEMBRANE CYTOCHROME B5'''
Line 28: Line 25:
[[Category: White, S P.]]
[[Category: White, S P.]]
[[Category: Zhang, X.]]
[[Category: Zhang, X.]]
-
[[Category: cytochrome]]
+
[[Category: Cytochrome]]
-
[[Category: electron transport]]
+
[[Category: Electron transport]]
-
[[Category: heme]]
+
[[Category: Heme]]
-
 
+
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Fri May 2 11:06:04 2008''
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Mar 30 18:54:11 2008''
+

Revision as of 08:06, 2 May 2008

Template:STRUCTURE 1b5m

RAT OUTER MITOCHONDRIAL MEMBRANE CYTOCHROME B5


Overview

The role played by the outer mitochondrial membrane (OM) cytochrome b5 heme propionate groups in the electrostatic binding between OM cytochrome b5 and horse heart cytochrome c was investigated by 13C NMR spectroscopy and X-ray crystallography. To achieve these aims, 13C-labeled heme OM cytochrome b5 was expressed in Escherichia coli as previously described [Rivera M., Walker, F.A. (1995) Anal. Biochem. 230, 295-302]. Assignment of the resonances arising from the heme propionate carbons in ferricytochrome b5 was carried out by a combination of one- and two-dimensional NMR experiments. Titrations of [13C]heme-labeled OM cytochrome b5 with horse heart cytochrome c were carried out in order to monitor the resonances arising from the heme propionate carbonyl carbons in OM cytochrome b5. The results from these titrations clearly show that only the heme propionate located on the exposed heme edge in OM cytochrome b5 participates in the electrostatic stabilization of the complex between OM cytochrome b5 and horse heart cytochrome c. Similar experiments carried out monitoring 13C resonances arising from several other heme substituents demonstrated that the stoichiometry of the complex is 1:1. A conditional binding constant, K which equals 3.8 x 10(4) +/- 1.4 x 10(4) at mu = 0.02 M, was obtained for the formation of the complex by fitting the binding curves obtained experimentally to a model based on this stoichiometry. The X-ray crystal structure of rat liver OM cytochrome b5 solved to 2.7 A resolution shows that the structures of bovine liver microsomal cytochrome b5 and rat liver OM cytochrome b5 are almost identical when compared at medium resolution. The similarity between the two structures, combined with the findings that only the heme propionate located on the exposed heme edge of OM cytochrome b5 participates in the electrostatic binding to cytochrome c and that the stability of this complex is similar to that measured for the association between microsomal cytochrome b5 and cytochrome c, clearly indicates that the site of interaction on OM cytochrome b5 is almost identical to the one elucidated for microsomal cytochrome b5. It is therefore possible to conclude that the large body of information gathered by many investigators for the nonphysiological interaction between microsomal cytochrome b5 and cytochrome c (recently reviewed) [Mauk, A. G. Mauk, M. R., Moore, G. R., & Northrup, S. H. (1995) Bioenerg. Biomembr. 27, 311-330] has indeed biological as well as pedagogical validity.

About this Structure

1B5M is a Single protein structure of sequence from Rattus norvegicus. Full crystallographic information is available from OCA.

Reference

13C NMR spectroscopic and X-ray crystallographic study of the role played by mitochondrial cytochrome b5 heme propionates in the electrostatic binding to cytochrome c., Rodriguez-Maranon MJ, Qiu F, Stark RE, White SP, Zhang X, Foundling SI, Rodriguez V, Schilling CL 3rd, Bunce RA, Rivera M, Biochemistry. 1996 Dec 17;35(50):16378-90. PMID:8973214 Page seeded by OCA on Fri May 2 11:06:04 2008

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools