5f0q

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
-
'''Unreleased structure'''
 
-
The entry 5f0q is ON HOLD until Paper Publication
+
==Crystal structure of C-terminal domain of the human DNA primase large subunit with bound DNA template/RNA primer==
 +
<StructureSection load='5f0q' size='340' side='right' caption='[[5f0q]], [[Resolution|resolution]] 2.21&Aring;' scene=''>
 +
== Structural highlights ==
 +
<table><tr><td colspan='2'>[[5f0q]] is a 6 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5F0Q OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5F0Q FirstGlance]. <br>
 +
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=SF4:IRON/SULFUR+CLUSTER'>SF4</scene></td></tr>
 +
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=GTP:GUANOSINE-5-TRIPHOSPHATE'>GTP</scene></td></tr>
 +
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[5f0s|5f0s]]</td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5f0q FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5f0q OCA], [http://pdbe.org/5f0q PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5f0q RCSB], [http://www.ebi.ac.uk/pdbsum/5f0q PDBsum]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[[http://www.uniprot.org/uniprot/PRI2_HUMAN PRI2_HUMAN]] DNA primase is the polymerase that synthesizes small RNA primers for the Okazaki fragments made during discontinuous DNA replication.
 +
<div style="background-color:#fffaf0;">
 +
== Publication Abstract from PubMed ==
 +
The human primosome, a 340 kilodalton complex of primase and DNA polymerase alpha (Pol alpha), synthesizes chimeric RNA-DNA primers to be extended by replicative DNA polymerases delta and . The intricate mechanism of concerted primer synthesis by two catalytic centers was an enigma for over three decades. Here we report the crystal structures of two key complexes, the human primosome and the C-terminal domain of the primase large subunit (p58C) with bound DNA/RNA duplex. These structures, along with analysis of primase/polymerase activities, provide a plausible mechanism for all transactions of the primosome including initiation, elongation, accurate counting of RNA primer length, primer transfer to Pol alpha, and concerted autoregulation of alternate activation/inhibition of the catalytic centers. Our findings reveal a central role of p58C in the coordinated actions of two catalytic domains in the primosome and ultimately could impact the design of anticancer drugs.
-
Authors: Tahirov, T.H., Baranovskiy, A.G., Babayeva, N.D.
+
MECHANISM OF CONCERTED RNA-DNA PRIMER SYNTHESIS BY THE HUMAN PRIMOSOME.,Baranovskiy AG, Babayeva ND, Zhang Y, Gu J, Suwa Y, Pavlov YI, Tahirov TH J Biol Chem. 2016 Mar 14. pii: jbc.M116.717405. PMID:26975377<ref>PMID:26975377</ref>
-
Description:
+
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
-
[[Category: Unreleased Structures]]
+
</div>
-
[[Category: Babayeva, N.D]]
+
<div class="pdbe-citations 5f0q" style="background-color:#fffaf0;"></div>
-
[[Category: Baranovskiy, A.G]]
+
== References ==
-
[[Category: Tahirov, T.H]]
+
<references/>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Babayeva, N D]]
 +
[[Category: Baranovskiy, A G]]
 +
[[Category: Tahirov, T H]]
 +
[[Category: Dna]]
 +
[[Category: Dna primase]]
 +
[[Category: Initiation site]]
 +
[[Category: Iron-sulfur cluster]]
 +
[[Category: Large subunit]]
 +
[[Category: Primer]]
 +
[[Category: Rna]]
 +
[[Category: Template]]
 +
[[Category: Tranferase-dna-rna complex]]
 +
[[Category: Triphosphate]]

Revision as of 17:03, 10 May 2016

Crystal structure of C-terminal domain of the human DNA primase large subunit with bound DNA template/RNA primer

5f0q, resolution 2.21Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools