Sandbox Reserved 1126
From Proteopedia
(Difference between revisions)
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==== Cofactor ==== | ==== Cofactor ==== | ||
- | *Heme iron : | + | *Heme iron: |
The heme is one of the two cofactors of hCBS. | The heme is one of the two cofactors of hCBS. | ||
It is bound in an hydrophobic pocket composed of the residues 50-67. The iron atom is hexacoordinated with the sulfhydryl group of Cys52 and the Nε2 atom of His65 (axial coordination) and with the four nitrogen atoms of the heme. | It is bound in an hydrophobic pocket composed of the residues 50-67. The iron atom is hexacoordinated with the sulfhydryl group of Cys52 and the Nε2 atom of His65 (axial coordination) and with the four nitrogen atoms of the heme. | ||
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It is supposed to act as a redox sensor or as a way to facilitate a correct folding. | It is supposed to act as a redox sensor or as a way to facilitate a correct folding. | ||
- | *Pyridoxal phosphate : | + | *Pyridoxal phosphate: |
==== Quaternary structure ==== | ==== Quaternary structure ==== | ||
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The hCBS is natively a homotetrameric enzyme. It is suggested that two monomers form a dimer, and then two dimers form a tetramer. | The hCBS is natively a homotetrameric enzyme. It is suggested that two monomers form a dimer, and then two dimers form a tetramer. | ||
- | *Dimer formation : link to the structure : two monomers shape a dimer through both hydrophobic and polar interactions within the catalytic core. Hydrophobic interactions particularly involve two Phe112 (one from each monomer) which interact with each other. There are no interactions between Bateman modules in a single dimer concerning hCBS. | + | *Dimer formation: link to the structure : two monomers shape a dimer through both hydrophobic and polar interactions within the catalytic core. Hydrophobic interactions particularly involve two Phe112 (one from each monomer) which interact with each other. There are no interactions between Bateman modules in a single dimer concerning hCBS. |
* Tetramer formation involves the Bateman modules as well as the catalytic core of each dimer. Each oligomerization loop (loop 513-519) of a monomer of one dimer interacts with the catalytic core of a monomer of the other dimer. Those loops interact within a crevace (shaped by α-helix 5-6-12-15-16 and β-strands 5-6) of the catalytic core. The tetramer is an inactive form of the enzyme. | * Tetramer formation involves the Bateman modules as well as the catalytic core of each dimer. Each oligomerization loop (loop 513-519) of a monomer of one dimer interacts with the catalytic core of a monomer of the other dimer. Those loops interact within a crevace (shaped by α-helix 5-6-12-15-16 and β-strands 5-6) of the catalytic core. The tetramer is an inactive form of the enzyme. |
Revision as of 12:29, 29 January 2016
This Sandbox is Reserved from 15/12/2015, through 15/06/2016 for use in the course "Structural Biology" taught by Bruno Kieffer at the University of Strasbourg, ESBS. This reservation includes Sandbox Reserved 1120 through Sandbox Reserved 1159. |
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Human cystathionine β-synthase (hCBS)
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