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3a1q
From Proteopedia
(Difference between revisions)
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==Crystal structure of the mouse RAP80 UIMs in complex with Lys63-linked di-ubiquitin== | ==Crystal structure of the mouse RAP80 UIMs in complex with Lys63-linked di-ubiquitin== | ||
<StructureSection load='3a1q' size='340' side='right' caption='[[3a1q]], [[Resolution|resolution]] 2.20Å' scene=''> | <StructureSection load='3a1q' size='340' side='right' caption='[[3a1q]], [[Resolution|resolution]] 2.20Å' scene=''> | ||
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<table><tr><td colspan='2'>[[3a1q]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/Lk3_transgenic_mice Lk3 transgenic mice]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3A1Q OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3A1Q FirstGlance]. <br> | <table><tr><td colspan='2'>[[3a1q]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/Lk3_transgenic_mice Lk3 transgenic mice]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3A1Q OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3A1Q FirstGlance]. <br> | ||
</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">Rps27a, Uba80, Ubcep1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10090 LK3 transgenic mice]), Uimc1, Rip110, Rxrip110 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10090 LK3 transgenic mice])</td></tr> | </td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">Rps27a, Uba80, Ubcep1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10090 LK3 transgenic mice]), Uimc1, Rip110, Rxrip110 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10090 LK3 transgenic mice])</td></tr> | ||
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3a1q FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3a1q OCA], [http://pdbe.org/3a1q PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3a1q RCSB], [http://www.ebi.ac.uk/pdbsum/3a1q PDBsum]</span></td></tr> | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3a1q FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3a1q OCA], [http://pdbe.org/3a1q PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3a1q RCSB], [http://www.ebi.ac.uk/pdbsum/3a1q PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3a1q ProSAT]</span></td></tr> |
</table> | </table> | ||
== Function == | == Function == | ||
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Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
| - | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/a1/3a1q_consurf.spt"</scriptWhenChecked> | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/a1/3a1q_consurf.spt"</scriptWhenChecked> |
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
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[[Category: Yamashita, M]] | [[Category: Yamashita, M]] | ||
[[Category: Yoshikawa, A]] | [[Category: Yoshikawa, A]] | ||
| + | [[Category: Cytoplasm]] | ||
[[Category: Gene regulation-signaling protein complex]] | [[Category: Gene regulation-signaling protein complex]] | ||
[[Category: Nucleus]] | [[Category: Nucleus]] | ||
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[[Category: Protein complex]] | [[Category: Protein complex]] | ||
[[Category: Transcription regulation]] | [[Category: Transcription regulation]] | ||
| + | [[Category: Ubl conjugation]] | ||
Revision as of 07:02, 18 October 2018
Crystal structure of the mouse RAP80 UIMs in complex with Lys63-linked di-ubiquitin
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