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3klo
From Proteopedia
(Difference between revisions)
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==Vibrio cholerae VpsT bound to c-di-GMP== | ==Vibrio cholerae VpsT bound to c-di-GMP== | ||
<StructureSection load='3klo' size='340' side='right' caption='[[3klo]], [[Resolution|resolution]] 2.80Å' scene=''> | <StructureSection load='3klo' size='340' side='right' caption='[[3klo]], [[Resolution|resolution]] 2.80Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>[[3klo]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/'vibrio_eltor' 'vibrio eltor']. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3KLO OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3KLO FirstGlance]. <br> | <table><tr><td colspan='2'>[[3klo]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/'vibrio_eltor' 'vibrio eltor']. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3KLO OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3KLO FirstGlance]. <br> | ||
| - | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=C2E:9,9-[(2R,3R, | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=C2E:9,9-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d 3,2-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one)'>C2E</scene>, <scene name='pdbligand=TAR:D(-)-TARTARIC+ACID'>TAR</scene></td></tr> |
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3kln|3kln]]</td></tr> | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3kln|3kln]]</td></tr> | ||
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">VCA0952, VC_A0952 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=686 'Vibrio eltor'])</td></tr> | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">VCA0952, VC_A0952 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=686 'Vibrio eltor'])</td></tr> | ||
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3klo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3klo OCA], [http://pdbe.org/3klo PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3klo RCSB], [http://www.ebi.ac.uk/pdbsum/3klo PDBsum]</span></td></tr> | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3klo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3klo OCA], [http://pdbe.org/3klo PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3klo RCSB], [http://www.ebi.ac.uk/pdbsum/3klo PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3klo ProSAT]</span></td></tr> |
</table> | </table> | ||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
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Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
| - | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/kl/3klo_consurf.spt"</scriptWhenChecked> | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/kl/3klo_consurf.spt"</scriptWhenChecked> |
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
Revision as of 09:40, 26 December 2018
Vibrio cholerae VpsT bound to c-di-GMP
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