This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2fa8

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
 +
==Crystal Structure of the Putative Selenoprotein W-related family Protein from Agrobacterium tumefaciens==
==Crystal Structure of the Putative Selenoprotein W-related family Protein from Agrobacterium tumefaciens==
<StructureSection load='2fa8' size='340' side='right' caption='[[2fa8]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
<StructureSection load='2fa8' size='340' side='right' caption='[[2fa8]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[2fa8]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Agrt5 Agrt5]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FA8 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2FA8 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[2fa8]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Agrfc Agrfc]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FA8 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2FA8 FirstGlance]. <br>
</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">atu0228 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=176299 AGRT5])</td></tr>
+
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">atu0228 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=176299 AGRFC])</td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2fa8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2fa8 OCA], [http://pdbe.org/2fa8 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2fa8 RCSB], [http://www.ebi.ac.uk/pdbsum/2fa8 PDBsum], [http://www.topsan.org/Proteins/MCSG/2fa8 TOPSAN]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2fa8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2fa8 OCA], [http://pdbe.org/2fa8 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2fa8 RCSB], [http://www.ebi.ac.uk/pdbsum/2fa8 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2fa8 ProSAT], [http://www.topsan.org/Proteins/MCSG/2fa8 TOPSAN]</span></td></tr>
</table>
</table>
== Evolutionary Conservation ==
== Evolutionary Conservation ==
Line 11: Line 12:
Check<jmol>
Check<jmol>
<jmolCheckbox>
<jmolCheckbox>
-
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/fa/2fa8_consurf.spt"</scriptWhenChecked>
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/fa/2fa8_consurf.spt"</scriptWhenChecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
Line 19: Line 20:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Agrt5]]
+
[[Category: Agrfc]]
[[Category: Edwards, A]]
[[Category: Edwards, A]]
[[Category: Joachimiak, A]]
[[Category: Joachimiak, A]]

Revision as of 09:21, 14 June 2018

Crystal Structure of the Putative Selenoprotein W-related family Protein from Agrobacterium tumefaciens

2fa8, resolution 1.90Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools