This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
3a95
From Proteopedia
(Difference between revisions)
| Line 1: | Line 1: | ||
| + | |||
==Crystal structure of hen egg white lysozyme soaked with 100mM RhCl3 at pH3.8== | ==Crystal structure of hen egg white lysozyme soaked with 100mM RhCl3 at pH3.8== | ||
<StructureSection load='3a95' size='340' side='right' caption='[[3a95]], [[Resolution|resolution]] 1.50Å' scene=''> | <StructureSection load='3a95' size='340' side='right' caption='[[3a95]], [[Resolution|resolution]] 1.50Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[3a95]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/ | + | <table><tr><td colspan='2'>[[3a95]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Gallus_gallus Gallus gallus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3A95 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3A95 FirstGlance]. <br> |
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=RH3:RHODIUM(III)+ION'>RH3</scene></td></tr> | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=RH3:RHODIUM(III)+ION'>RH3</scene></td></tr> | ||
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3a8z|3a8z]], [[3a90|3a90]], [[3a91|3a91]], [[3a92|3a92]], [[3a93|3a93]], [[3a94|3a94]], [[3a96|3a96]]</td></tr> | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3a8z|3a8z]], [[3a90|3a90]], [[3a91|3a91]], [[3a92|3a92]], [[3a93|3a93]], [[3a94|3a94]], [[3a96|3a96]]</td></tr> | ||
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Lysozyme Lysozyme], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.1.17 3.2.1.17] </span></td></tr> | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Lysozyme Lysozyme], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.1.17 3.2.1.17] </span></td></tr> | ||
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3a95 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3a95 OCA], [http://pdbe.org/3a95 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3a95 RCSB], [http://www.ebi.ac.uk/pdbsum/3a95 PDBsum]</span></td></tr> | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3a95 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3a95 OCA], [http://pdbe.org/3a95 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3a95 RCSB], [http://www.ebi.ac.uk/pdbsum/3a95 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3a95 ProSAT]</span></td></tr> |
</table> | </table> | ||
== Function == | == Function == | ||
| Line 14: | Line 15: | ||
Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
| - | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/a9/3a95_consurf.spt"</scriptWhenChecked> | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/a9/3a95_consurf.spt"</scriptWhenChecked> |
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
| Line 36: | Line 37: | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| - | [[Category: | + | [[Category: Gallus gallus]] |
[[Category: Lysozyme]] | [[Category: Lysozyme]] | ||
[[Category: Abe, S]] | [[Category: Abe, S]] | ||
Revision as of 08:11, 24 October 2018
Crystal structure of hen egg white lysozyme soaked with 100mM RhCl3 at pH3.8
| |||||||||||
Categories: Gallus gallus | Lysozyme | Abe, S | Hikage, T | Koshiyama, T | Ohki, T | Ueno, T | Watanabe, Y | Allergen | Antimicrobial | Bacteriolytic enzyme | Disulfide bond | Glycosidase | Hydrolase

