3fm1
From Proteopedia
(Difference between revisions)
| Line 1: | Line 1: | ||
| + | |||
==Crystal Structure Analysis of Fungal Versatile Peroxidase from Pleurotus eryngii== | ==Crystal Structure Analysis of Fungal Versatile Peroxidase from Pleurotus eryngii== | ||
<StructureSection load='3fm1' size='340' side='right' caption='[[3fm1]], [[Resolution|resolution]] 1.78Å' scene=''> | <StructureSection load='3fm1' size='340' side='right' caption='[[3fm1]], [[Resolution|resolution]] 1.78Å' scene=''> | ||
| Line 7: | Line 8: | ||
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">VPL2 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=5323 Boletus of the steppes])</td></tr> | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">VPL2 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=5323 Boletus of the steppes])</td></tr> | ||
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Versatile_peroxidase Versatile peroxidase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.11.1.16 1.11.1.16] </span></td></tr> | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Versatile_peroxidase Versatile peroxidase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.11.1.16 1.11.1.16] </span></td></tr> | ||
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3fm1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3fm1 OCA], [http://pdbe.org/3fm1 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3fm1 RCSB], [http://www.ebi.ac.uk/pdbsum/3fm1 PDBsum]</span></td></tr> | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3fm1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3fm1 OCA], [http://pdbe.org/3fm1 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3fm1 RCSB], [http://www.ebi.ac.uk/pdbsum/3fm1 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3fm1 ProSAT]</span></td></tr> |
</table> | </table> | ||
== Function == | == Function == | ||
| Line 15: | Line 16: | ||
Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
| - | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/fm/3fm1_consurf.spt"</scriptWhenChecked> | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/fm/3fm1_consurf.spt"</scriptWhenChecked> |
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
| Line 31: | Line 32: | ||
[[Category: Piontek, K]] | [[Category: Piontek, K]] | ||
[[Category: Plattner, D A]] | [[Category: Plattner, D A]] | ||
| + | [[Category: Calcium]] | ||
[[Category: Electron transfer]] | [[Category: Electron transfer]] | ||
[[Category: Heme]] | [[Category: Heme]] | ||
| Line 42: | Line 44: | ||
[[Category: Mn-independent oxidation phenolic non-phenolic aromatic]] | [[Category: Mn-independent oxidation phenolic non-phenolic aromatic]] | ||
[[Category: Mnii oxidation]] | [[Category: Mnii oxidation]] | ||
| + | [[Category: Organic radical]] | ||
[[Category: Oxidoreductase]] | [[Category: Oxidoreductase]] | ||
[[Category: Peroxidase]] | [[Category: Peroxidase]] | ||
Revision as of 08:03, 5 December 2018
Crystal Structure Analysis of Fungal Versatile Peroxidase from Pleurotus eryngii
| |||||||||||
Categories: Boletus of the steppes | Versatile peroxidase | Choinowski, T | Martinez, A T | Piontek, K | Plattner, D A | Calcium | Electron transfer | Heme | Hydrogen peroxide | Iron | Lignin degradation | Lignin peroxidase | Manganese | Manganese peroxidase | Metal-binding | Mn-independent oxidation phenolic non-phenolic aromatic | Mnii oxidation | Organic radical | Oxidoreductase | Peroxidase | Polyvalent peroxidase | Protoporphyrin ix | Secreted | Zymogen
