This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
1ny8
From Proteopedia
(Difference between revisions)
| Line 1: | Line 1: | ||
| + | |||
==Solution structure of Protein yrbA from Escherichia Coli: Northeast Structural Genomics Consortium target ER115== | ==Solution structure of Protein yrbA from Escherichia Coli: Northeast Structural Genomics Consortium target ER115== | ||
<StructureSection load='1ny8' size='340' side='right' caption='[[1ny8]], [[NMR_Ensembles_of_Models | 16 NMR models]]' scene=''> | <StructureSection load='1ny8' size='340' side='right' caption='[[1ny8]], [[NMR_Ensembles_of_Models | 16 NMR models]]' scene=''> | ||
| Line 4: | Line 5: | ||
<table><tr><td colspan='2'>[[1ny8]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/"bacillus_coli"_migula_1895 "bacillus coli" migula 1895]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1NY8 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1NY8 FirstGlance]. <br> | <table><tr><td colspan='2'>[[1ny8]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/"bacillus_coli"_migula_1895 "bacillus coli" migula 1895]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1NY8 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1NY8 FirstGlance]. <br> | ||
</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">YRBA ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=562 "Bacillus coli" Migula 1895])</td></tr> | </td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">YRBA ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=562 "Bacillus coli" Migula 1895])</td></tr> | ||
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1ny8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ny8 OCA], [http://pdbe.org/1ny8 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1ny8 RCSB], [http://www.ebi.ac.uk/pdbsum/1ny8 PDBsum], [http://www.topsan.org/Proteins/NESGC/1ny8 TOPSAN]</span></td></tr> | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1ny8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ny8 OCA], [http://pdbe.org/1ny8 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1ny8 RCSB], [http://www.ebi.ac.uk/pdbsum/1ny8 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1ny8 ProSAT], [http://www.topsan.org/Proteins/NESGC/1ny8 TOPSAN]</span></td></tr> |
</table> | </table> | ||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
| Line 10: | Line 11: | ||
Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
| - | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ny/1ny8_consurf.spt"</scriptWhenChecked> | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ny/1ny8_consurf.spt"</scriptWhenChecked> |
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
Revision as of 07:01, 7 February 2018
Solution structure of Protein yrbA from Escherichia Coli: Northeast Structural Genomics Consortium target ER115
| |||||||||||
