This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
1q9w
From Proteopedia
(Difference between revisions)
| Line 1: | Line 1: | ||
| + | |||
==S45-18 Fab pentasaccharide bisphosphate complex== | ==S45-18 Fab pentasaccharide bisphosphate complex== | ||
<StructureSection load='1q9w' size='340' side='right' caption='[[1q9w]], [[Resolution|resolution]] 1.75Å' scene=''> | <StructureSection load='1q9w' size='340' side='right' caption='[[1q9w]], [[Resolution|resolution]] 1.75Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>[[1q9w]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1Q9W OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1Q9W FirstGlance]. <br> | <table><tr><td colspan='2'>[[1q9w]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1Q9W OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1Q9W FirstGlance]. <br> | ||
| - | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"> | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GP1:GLUCOSAMINE+1-PHOSPHATE'>GP1</scene>, <scene name='pdbligand=GP4:GLUCOSAMINE+4-PHOSPHATE'>GP4</scene>, <scene name='pdbligand=KDO:3-DEOXY-D-MANNO-OCT-2-ULOSONIC+ACID'>KDO</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr> |
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1q9o|1q9o]], [[1q9q|1q9q]], [[1q9r|1q9r]], [[1q9t|1q9t]], [[1q9v|1q9v]], [[1q9k|1q9k]], [[1q9l|1q9l]]</td></tr> | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1q9o|1q9o]], [[1q9q|1q9q]], [[1q9r|1q9r]], [[1q9t|1q9t]], [[1q9v|1q9v]], [[1q9k|1q9k]], [[1q9l|1q9l]]</td></tr> | ||
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1q9w FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1q9w OCA], [http://pdbe.org/1q9w PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1q9w RCSB], [http://www.ebi.ac.uk/pdbsum/1q9w PDBsum]</span></td></tr> | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1q9w FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1q9w OCA], [http://pdbe.org/1q9w PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1q9w RCSB], [http://www.ebi.ac.uk/pdbsum/1q9w PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1q9w ProSAT]</span></td></tr> |
</table> | </table> | ||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
| Line 11: | Line 12: | ||
Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
| - | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/q9/1q9w_consurf.spt"</scriptWhenChecked> | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/q9/1q9w_consurf.spt"</scriptWhenChecked> |
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
| Line 26: | Line 27: | ||
</div> | </div> | ||
<div class="pdbe-citations 1q9w" style="background-color:#fffaf0;"></div> | <div class="pdbe-citations 1q9w" style="background-color:#fffaf0;"></div> | ||
| - | |||
| - | ==See Also== | ||
| - | *[[Antibody|Antibody]] | ||
== References == | == References == | ||
<references/> | <references/> | ||
Revision as of 08:11, 24 February 2018
S45-18 Fab pentasaccharide bisphosphate complex
| |||||||||||

