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2w5e
From Proteopedia
(Difference between revisions)
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| - | == | + | |
| + | ==Structural and biochemical analysis of human pathogenic astrovirus serine protease at 2.0 Angstrom resolution== | ||
<StructureSection load='2w5e' size='340' side='right' caption='[[2w5e]], [[Resolution|resolution]] 2.00Å' scene=''> | <StructureSection load='2w5e' size='340' side='right' caption='[[2w5e]], [[Resolution|resolution]] 2.00Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>[[2w5e]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/Hasv1 Hasv1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2W5E OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2W5E FirstGlance]. <br> | <table><tr><td colspan='2'>[[2w5e]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/Hasv1 Hasv1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2W5E OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2W5E FirstGlance]. <br> | ||
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CD:CADMIUM+ION'>CD</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene></td></tr> | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CD:CADMIUM+ION'>CD</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene></td></tr> | ||
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2w5e FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2w5e OCA], [http://pdbe.org/2w5e PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2w5e RCSB], [http://www.ebi.ac.uk/pdbsum/2w5e PDBsum]</span></td></tr> | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2w5e FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2w5e OCA], [http://pdbe.org/2w5e PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2w5e RCSB], [http://www.ebi.ac.uk/pdbsum/2w5e PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2w5e ProSAT]</span></td></tr> |
</table> | </table> | ||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
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Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
| - | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/w5/2w5e_consurf.spt"</scriptWhenChecked> | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/w5/2w5e_consurf.spt"</scriptWhenChecked> |
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
| Line 42: | Line 43: | ||
[[Category: Astrovirus]] | [[Category: Astrovirus]] | ||
[[Category: Catalytic triad]] | [[Category: Catalytic triad]] | ||
| + | [[Category: Coiled coil]] | ||
[[Category: Hydrolase]] | [[Category: Hydrolase]] | ||
[[Category: Membrane]] | [[Category: Membrane]] | ||
[[Category: Protease]] | [[Category: Protease]] | ||
| + | [[Category: Ribosomal frameshifting]] | ||
[[Category: Rna replication]] | [[Category: Rna replication]] | ||
[[Category: Serine protease]] | [[Category: Serine protease]] | ||
[[Category: Thiol protease]] | [[Category: Thiol protease]] | ||
[[Category: Transmembrane]] | [[Category: Transmembrane]] | ||
Revision as of 09:38, 26 September 2018
Structural and biochemical analysis of human pathogenic astrovirus serine protease at 2.0 Angstrom resolution
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Categories: Hasv1 | Barthel, J | Bonivento, D | Canard, B | Coutard, B | Mattevi, A | Nenci, S | Robel, I | Rohayem, J | Speroni, S | Antiviral | Astrovirus | Catalytic triad | Coiled coil | Hydrolase | Membrane | Protease | Ribosomal frameshifting | Rna replication | Serine protease | Thiol protease | Transmembrane
