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2gtl
From Proteopedia
(Difference between revisions)
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==Lumbricus Erythrocruorin at 3.5A resolution== | ==Lumbricus Erythrocruorin at 3.5A resolution== | ||
<StructureSection load='2gtl' size='340' side='right' caption='[[2gtl]], [[Resolution|resolution]] 3.50Å' scene=''> | <StructureSection load='2gtl' size='340' side='right' caption='[[2gtl]], [[Resolution|resolution]] 3.50Å' scene=''> | ||
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<table><tr><td colspan='2'>[[2gtl]] is a 15 chain structure with sequence from [http://en.wikipedia.org/wiki/Lumbricus_terrestris Lumbricus terrestris]. The March 2013 RCSB PDB [http://pdb.rcsb.org/pdb/static.do?p=education_discussion/molecule_of_the_month/index.html Molecule of the Month] feature on ''Erythrocruorin'' by David Goodsell is [http://dx.doi.org/10.2210/rcsb_pdb/mom_2013_3 10.2210/rcsb_pdb/mom_2013_3]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2GTL OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2GTL FirstGlance]. <br> | <table><tr><td colspan='2'>[[2gtl]] is a 15 chain structure with sequence from [http://en.wikipedia.org/wiki/Lumbricus_terrestris Lumbricus terrestris]. The March 2013 RCSB PDB [http://pdb.rcsb.org/pdb/static.do?p=education_discussion/molecule_of_the_month/index.html Molecule of the Month] feature on ''Erythrocruorin'' by David Goodsell is [http://dx.doi.org/10.2210/rcsb_pdb/mom_2013_3 10.2210/rcsb_pdb/mom_2013_3]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2GTL OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2GTL FirstGlance]. <br> | ||
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CMO:CARBON+MONOXIDE'>CMO</scene>, <scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr> | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CMO:CARBON+MONOXIDE'>CMO</scene>, <scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr> | ||
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2gtl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2gtl OCA], [http://pdbe.org/2gtl PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2gtl RCSB], [http://www.ebi.ac.uk/pdbsum/2gtl PDBsum]</span></td></tr> | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2gtl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2gtl OCA], [http://pdbe.org/2gtl PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2gtl RCSB], [http://www.ebi.ac.uk/pdbsum/2gtl PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2gtl ProSAT]</span></td></tr> |
</table> | </table> | ||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
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Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
| - | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gt/2gtl_consurf.spt"</scriptWhenChecked> | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gt/2gtl_consurf.spt"</scriptWhenChecked> |
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
Revision as of 06:20, 27 June 2018
Lumbricus Erythrocruorin at 3.5A resolution
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Categories: Erythrocruorin | Lumbricus terrestris | RCSB PDB Molecule of the Month | Bhyravbhatla, B | Knapp, J E | Royer, W E | Sharma, H | Strand, K | Annelid erythrocruorin | Dihedral d6 symmetry | Hexagonal bilayer | Oxygen storage-transport complex | Respiratory protein | Triple stranded helical coil
