1rwt

From Proteopedia

(Difference between revisions)

Revision as of 08:41, 12 October 2017

Crystal Structure of Spinach Major Light-harvesting complex at 2.72 Angstrom Resolution

Structural highlights

1rwt is a 10 chain structure with sequence from Spiol. The November 2004 RCSB PDB Molecule of the Month feature on Photosystem II by David S. Goodsell is 10.2210/rcsb_pdb/mom_2004_11. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Ligands:	, , , , , , , ,
Resources:	FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

[CB2A_SPIOL] The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated.

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

Publication Abstract from PubMed

The major light-harvesting complex of photosystem II (LHC-II) serves as the principal solar energy collector in the photosynthesis of green plants and presumably also functions in photoprotection under high-light conditions. Here we report the first X-ray structure of LHC-II in icosahedral proteoliposome assembly at atomic detail. One asymmetric unit of a large R32 unit cell contains ten LHC-II monomers. The 14 chlorophylls (Chl) in each monomer can be unambiguously distinguished as eight Chla and six Chlb molecules. Assignment of the orientation of the transition dipole moment of each chlorophyll has been achieved. All Chlb are located around the interface between adjacent monomers, and together with Chla they are the basis for efficient light harvesting. Four carotenoid-binding sites per monomer have been observed. The xanthophyll-cycle carotenoid at the monomer-monomer interface may be involved in the non-radiative dissipation of excessive energy, one of the photoprotective strategies that have evolved in plants.

Crystal structure of spinach major light-harvesting complex at 2.72 A resolution.,Liu Z, Yan H, Wang K, Kuang T, Zhang J, Gui L, An X, Chang W Nature. 2004 Mar 18;428(6980):287-92. PMID:15029188^[1]

From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

References

↑ Liu Z, Yan H, Wang K, Kuang T, Zhang J, Gui L, An X, Chang W. Crystal structure of spinach major light-harvesting complex at 2.72 A resolution. Nature. 2004 Mar 18;428(6980):287-92. PMID:15029188 doi:10.1038/nature02373

1 Structural highlights
2 Function
3 Evolutionary Conservation
4 Publication Abstract from PubMed
5 References

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/1rwt"

@@ Line 1: / Line 1: @@
 ==Crystal Structure of Spinach Major Light-harvesting complex at 2.72 Angstrom Resolution==
 <StructureSection load='1rwt' size='340' side='right' caption='[[1rwt]], [[Resolution|resolution]] 2.72&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[1rwt]] is a 10 chain structure with sequence from [http://en.wikipedia.org/wiki/Spinacia_oleracea Spinacia oleracea]. The November 2004 RCSB PDB [http://pdb.rcsb.org/pdb/static.do?p=education_discussion/molecule_of_the_month/index.html Molecule of the Month] feature on ''Photosystem II''  by David S. Goodsell is [http://dx.doi.org/10.2210/rcsb_pdb/mom_2004_11 10.2210/rcsb_pdb/mom_2004_11]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1RWT OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1RWT FirstGlance]. <br>
+<table><tr><td colspan='2'>[[1rwt]] is a 10 chain structure with sequence from [http://en.wikipedia.org/wiki/Spiol Spiol]. The November 2004 RCSB PDB [http://pdb.rcsb.org/pdb/static.do?p=education_discussion/molecule_of_the_month/index.html Molecule of the Month] feature on ''Photosystem II''  by David S. Goodsell is [http://dx.doi.org/10.2210/rcsb_pdb/mom_2004_11 10.2210/rcsb_pdb/mom_2004_11]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1RWT OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1RWT FirstGlance]. <br>
 </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=BNG:B-NONYLGLUCOSIDE'>BNG</scene>, <scene name='pdbligand=CHL:CHLOROPHYLL+B'>CHL</scene>, <scene name='pdbligand=CLA:CHLOROPHYLL+A'>CLA</scene>, <scene name='pdbligand=DGD:DIGALACTOSYL+DIACYL+GLYCEROL+(DGDG)'>DGD</scene>, <scene name='pdbligand=LHG:1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE'>LHG</scene>, <scene name='pdbligand=LUT:(3R,3R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3-DIOL'>LUT</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=NEX:(1R,3R)-6-{(3E,5E,7E,9E,11E,13E,15E,17E)-18-[(1S,4R,6R)-4-HYDROXY-2,2,6-TRIMETHYL-7-OXABICYCLO[4.1.0]HEPT-1-YL]-3,7,12,16-TETRAMETHYLOCTADECA-1,3,5,7,9,11,13,15,17-NONAENYLIDENE}-1,5,5-TRIMETHYLCYCLOHEXANE-1,3-DIOL'>NEX</scene>, <scene name='pdbligand=XAT:(3S,5R,6S,3S,5R,6S)-5,6,5,6-DIEPOXY-5,6,5,6-+TETRAHYDRO-BETA,BETA-CAROTENE-3,3-DIOL'>XAT</scene></td></tr>
-<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1rwt FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1rwt OCA], [http://pdbe.org/1rwt PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1rwt RCSB], [http://www.ebi.ac.uk/pdbsum/1rwt PDBsum]</span></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1rwt FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1rwt OCA], [http://pdbe.org/1rwt PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1rwt RCSB], [http://www.ebi.ac.uk/pdbsum/1rwt PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1rwt ProSAT]</span></td></tr>
 </table>
 == Function ==
@@ Line 33: / Line 34: @@
 [[Category: Photosystem II]]
 [[Category: RCSB PDB Molecule of the Month]]
-[[Category: Spinacia oleracea]]
+[[Category: Spiol]]
 [[Category: An, X]]
 [[Category: Chang, W]]

1rwt

From Proteopedia

Revision as of 08:41, 12 October 2017

Crystal Structure of Spinach Major Light-harvesting complex at 2.72 Angstrom Resolution

Structural highlights

Function

Evolutionary Conservation

Publication Abstract from PubMed

References

Contents

Proteopedia Page Contributors and Editors (what is this?)

Views

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