1fb5

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[[Image:1fb5.jpg|left|200px]]
[[Image:1fb5.jpg|left|200px]]
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{{Structure
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<!--
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|PDB= 1fb5 |SIZE=350|CAPTION= <scene name='initialview01'>1fb5</scene>, resolution 3.5&Aring;
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The line below this paragraph, containing "STRUCTURE_1fb5", creates the "Structure Box" on the page.
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|SITE=
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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|LIGAND= <scene name='pdbligand=NVA:NORVALINE'>NVA</scene>
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Ornithine_carbamoyltransferase Ornithine carbamoyltransferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.1.3.3 2.1.3.3] </span>
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or leave the SCENE parameter empty for the default display.
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|GENE=
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|DOMAIN=
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{{STRUCTURE_1fb5| PDB=1fb5 | SCENE= }}
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|RELATEDENTRY=[[1oth|1OTH]]
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|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1fb5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1fb5 OCA], [http://www.ebi.ac.uk/pdbsum/1fb5 PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1fb5 RCSB]</span>
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}}
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'''LOW RESOLUTION STRUCTURE OF OVINE ORNITHINE TRANSCARBMOYLASE IN THE UNLIGANDED STATE'''
'''LOW RESOLUTION STRUCTURE OF OVINE ORNITHINE TRANSCARBMOYLASE IN THE UNLIGANDED STATE'''
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[[Category: Panzalorto, M.]]
[[Category: Panzalorto, M.]]
[[Category: Zanotti, G.]]
[[Category: Zanotti, G.]]
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[[Category: cooperativity]]
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[[Category: Cooperativity]]
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[[Category: ornithine]]
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[[Category: Ornithine]]
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[[Category: t-state]]
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[[Category: T-state]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Fri May 2 16:07:18 2008''
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Mar 30 20:19:32 2008''
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Revision as of 13:07, 2 May 2008

Template:STRUCTURE 1fb5

LOW RESOLUTION STRUCTURE OF OVINE ORNITHINE TRANSCARBMOYLASE IN THE UNLIGANDED STATE


Overview

Ornithine transcarbamoylase from ovine liver has been purified to homogeneity. Like all anabolic OTCs, the ovine enzyme is a trimer, constituted by identical subunits of 34 kDa. Sequence analysis of the 54 N-terminal residues of ovine OTC shows a high degree of homology with the human enzyme. The optimum pH and the Michaelis constants for the catalytic reaction were determined. The ovine enzyme is the most thermostable one among mammals OTCs, its critical temperature being 6 degrees C higher than those measured for the other enzymes. The enzyme has been crystallised and the structure determined at 3.5 A resolution. Crystals belong to the cubic P4(3)32 space group, with a = b = c = 184.7 A and a solvent content of about 80%. There is no evidence of any ligand in the active site cavity, indicating that the crystals contain an unliganded or T state of the enzyme. The unliganded OTCase enzyme adopts a trimeric structure which, in the crystal, presents a three-fold axis coincident with the crystallographic one. The conformation of each monomer in the trimer is quite similar to that of the liganded human protein, with the exception of a few loops, directly interacting with the substrate(s), which are able to induce a rearrangement of the quaternary organisation of the trimer, that accounts for the cooperative behaviour of the enzyme following the binding of the substrates.

About this Structure

1FB5 is a Single protein structure of sequence from Ovis aries. Full crystallographic information is available from OCA.

Reference

Functional and structural characterization of ovine ornithine transcarbamoylase., De Gregorio A, Battistutta R, Arena N, Panzalorto M, Francescato P, Valentini G, Bruno G, Zanotti G, Org Biomol Chem. 2003 Sep 21;1(18):3178-85. PMID:14527149 Page seeded by OCA on Fri May 2 16:07:18 2008

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