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2et7

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Revision as of 07:28, 18 October 2017

Structural and spectroscopic insights into the mechanism of oxalate oxidase

Structural highlights

2et7 is a 1 chain structure with sequence from Barley. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Ligands:
Related:	1fi2, 2et1, 2ete
Activity:	Oxalate oxidase, with EC number 1.2.3.4
Resources:	FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

[OXO1_HORVU] Releases hydrogen peroxide in the apoplast which may be important for cross-linking reactions in the cell wall biochemistry. May play an important role in several aspects of plant growth and defense mechanisms.

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

Publication Abstract from PubMed

Oxalate oxidase (EC 1.2.3.4) catalyzes the conversion of oxalate and dioxygen to hydrogen peroxide and carbon dioxide. In this study, glycolate was used as a structural analogue of oxalate to investigate substrate binding in the crystalline enzyme. The observed monodentate binding of glycolate to the active site manganese ion of oxalate oxidase is consistent with a mechanism involving C-C bond cleavage driven by superoxide anion attack on a monodentate coordinated substrate. In this mechanism, the metal serves two functions: to organize the substrates (oxalate and dioxygen) and to transiently reduce dioxygen. The observed structure further implies important roles for specific active site residues (two asparagines and one glutamine) in correctly orientating the substrates and reaction intermediates for catalysis. Combined spectroscopic, biochemical, and structural analyses of mutants confirms the importance of the asparagine residues in organizing a functional active site complex.

Structural and spectroscopic studies shed light on the mechanism of oxalate oxidase.,Opaleye O, Rose RS, Whittaker MM, Woo EJ, Whittaker JW, Pickersgill RW J Biol Chem. 2006 Mar 10;281(10):6428-33. Epub 2005 Nov 15. PMID:16291738^[1]

From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

References

↑ Opaleye O, Rose RS, Whittaker MM, Woo EJ, Whittaker JW, Pickersgill RW. Structural and spectroscopic studies shed light on the mechanism of oxalate oxidase. J Biol Chem. 2006 Mar 10;281(10):6428-33. Epub 2005 Nov 15. PMID:16291738 doi:10.1074/jbc.M510256200

1 Structural highlights
2 Function
3 Evolutionary Conservation
4 Publication Abstract from PubMed
5 References

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/2et7"

@@ Line 1: / Line 1: @@
 ==Structural and spectroscopic insights into the mechanism of oxalate oxidase==
 <StructureSection load='2et7' size='340' side='right' caption='[[2et7]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
@@ Line 6: / Line 7: @@
 <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1fi2|1fi2]], [[2et1|2et1]], [[2ete|2ete]]</td></tr>
 <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Oxalate_oxidase Oxalate oxidase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.2.3.4 1.2.3.4] </span></td></tr>
-<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2et7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2et7 OCA], [http://pdbe.org/2et7 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2et7 RCSB], [http://www.ebi.ac.uk/pdbsum/2et7 PDBsum]</span></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2et7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2et7 OCA], [http://pdbe.org/2et7 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2et7 RCSB], [http://www.ebi.ac.uk/pdbsum/2et7 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2et7 ProSAT]</span></td></tr>
 </table>
 == Function ==

2et7

From Proteopedia

Revision as of 07:28, 18 October 2017

Structural and spectroscopic insights into the mechanism of oxalate oxidase

Structural highlights

Function

Evolutionary Conservation

Publication Abstract from PubMed

References

Contents

Proteopedia Page Contributors and Editors (what is this?)

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