This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
1ug8
From Proteopedia
(Difference between revisions)
| Line 1: | Line 1: | ||
| + | |||
==NMR structure of the R3H domain from Poly(A)-specific Ribonuclease== | ==NMR structure of the R3H domain from Poly(A)-specific Ribonuclease== | ||
<StructureSection load='1ug8' size='340' side='right' caption='[[1ug8]], [[NMR_Ensembles_of_Models | 20 NMR models]]' scene=''> | <StructureSection load='1ug8' size='340' side='right' caption='[[1ug8]], [[NMR_Ensembles_of_Models | 20 NMR models]]' scene=''> | ||
| Line 4: | Line 5: | ||
<table><tr><td colspan='2'>[[1ug8]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Lk3_transgenic_mice Lk3 transgenic mice]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1UG8 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1UG8 FirstGlance]. <br> | <table><tr><td colspan='2'>[[1ug8]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Lk3_transgenic_mice Lk3 transgenic mice]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1UG8 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1UG8 FirstGlance]. <br> | ||
</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">RIKEN cDNA 1200003I18 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10090 LK3 transgenic mice])</td></tr> | </td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">RIKEN cDNA 1200003I18 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10090 LK3 transgenic mice])</td></tr> | ||
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1ug8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ug8 OCA], [http://pdbe.org/1ug8 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1ug8 RCSB], [http://www.ebi.ac.uk/pdbsum/1ug8 PDBsum], [http://www.topsan.org/Proteins/RSGI/1ug8 TOPSAN]</span></td></tr> | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1ug8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ug8 OCA], [http://pdbe.org/1ug8 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1ug8 RCSB], [http://www.ebi.ac.uk/pdbsum/1ug8 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1ug8 ProSAT], [http://www.topsan.org/Proteins/RSGI/1ug8 TOPSAN]</span></td></tr> |
</table> | </table> | ||
== Function == | == Function == | ||
| Line 12: | Line 13: | ||
Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
| - | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ug/1ug8_consurf.spt"</scriptWhenChecked> | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ug/1ug8_consurf.spt"</scriptWhenChecked> |
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
Revision as of 07:40, 28 March 2018
NMR structure of the R3H domain from Poly(A)-specific Ribonuclease
| |||||||||||
Categories: Lk3 transgenic mice | Aoki, M | Arakawa, T | Carninci, P | Hayami, N | Hayashizaki, Y | Hirota, H | Inoue, M | Kawai, J | Kigawa, T | Kobayashi, N | Matsuda, T | Matsuo, Y | Muto, Y | Nagata, T | Osanai, T | Structural genomic | Seki, E | Shirouzu, M | Tanaka, A | Terada, T | Uda, H | Yabuki, T | Yokoyama, S | Yoshida, M | Hydrolase | Parn | R3h domain | Rsgi
