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1zcc
From Proteopedia
(Difference between revisions)
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==Crystal structure of glycerophosphodiester phosphodiesterase from Agrobacterium tumefaciens str.C58== | ==Crystal structure of glycerophosphodiester phosphodiesterase from Agrobacterium tumefaciens str.C58== | ||
<StructureSection load='1zcc' size='340' side='right' caption='[[1zcc]], [[Resolution|resolution]] 2.50Å' scene=''> | <StructureSection load='1zcc' size='340' side='right' caption='[[1zcc]], [[Resolution|resolution]] 2.50Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[1zcc]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/ | + | <table><tr><td colspan='2'>[[1zcc]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/Agrfc Agrfc]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1ZCC OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1ZCC FirstGlance]. <br> |
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr> | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr> | ||
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1zcc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1zcc OCA], [http://pdbe.org/1zcc PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1zcc RCSB], [http://www.ebi.ac.uk/pdbsum/1zcc PDBsum], [http://www.topsan.org/Proteins/NYSGXRC/1zcc TOPSAN]</span></td></tr> | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1zcc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1zcc OCA], [http://pdbe.org/1zcc PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1zcc RCSB], [http://www.ebi.ac.uk/pdbsum/1zcc PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1zcc ProSAT], [http://www.topsan.org/Proteins/NYSGXRC/1zcc TOPSAN]</span></td></tr> |
</table> | </table> | ||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
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Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
| - | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/zc/1zcc_consurf.spt"</scriptWhenChecked> | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/zc/1zcc_consurf.spt"</scriptWhenChecked> |
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1zcc ConSurf]. | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1zcc ConSurf]. | ||
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
| - | |||
| - | ==See Also== | ||
| - | *[[Phosphodiesterase|Phosphodiesterase]] | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| - | [[Category: | + | [[Category: Agrfc]] |
[[Category: Burley, S K]] | [[Category: Burley, S K]] | ||
[[Category: Krishnamurthy, N R]] | [[Category: Krishnamurthy, N R]] | ||
Revision as of 08:46, 2 May 2018
Crystal structure of glycerophosphodiester phosphodiesterase from Agrobacterium tumefaciens str.C58
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Categories: Agrfc | Burley, S K | Krishnamurthy, N R | Kumaran, D | Structural genomic | Swaminathan, S | Agrobacterium tumefaciens str. c58 | Glycerophosphodiester phosphodiesterase | Hydrolase | NYSGXRC, New York SGX Research Center for Structural Genomics | PSI, Protein structure initiative | T2047
