This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
1gxh
From Proteopedia
(Difference between revisions)
| Line 1: | Line 1: | ||
| - | == | + | |
| + | ==Colicin E8 DNAse immunity protein: Im8== | ||
<StructureSection load='1gxh' size='340' side='right' caption='[[1gxh]], [[NMR_Ensembles_of_Models | 20 NMR models]]' scene=''> | <StructureSection load='1gxh' size='340' side='right' caption='[[1gxh]], [[NMR_Ensembles_of_Models | 20 NMR models]]' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>[[1gxh]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/"bacillus_coli"_migula_1895 "bacillus coli" migula 1895]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=1imy 1imy]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1GXH OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1GXH FirstGlance]. <br> | <table><tr><td colspan='2'>[[1gxh]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/"bacillus_coli"_migula_1895 "bacillus coli" migula 1895]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=1imy 1imy]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1GXH OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1GXH FirstGlance]. <br> | ||
</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1gxg|1gxg]], [[1imy|1imy]], [[1imz|1imz]]</td></tr> | </td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1gxg|1gxg]], [[1imy|1imy]], [[1imz|1imz]]</td></tr> | ||
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1gxh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1gxh OCA], [http://pdbe.org/1gxh PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1gxh RCSB], [http://www.ebi.ac.uk/pdbsum/1gxh PDBsum]</span></td></tr> | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1gxh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1gxh OCA], [http://pdbe.org/1gxh PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1gxh RCSB], [http://www.ebi.ac.uk/pdbsum/1gxh PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1gxh ProSAT]</span></td></tr> |
</table> | </table> | ||
== Function == | == Function == | ||
| Line 12: | Line 13: | ||
Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
| - | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gx/1gxh_consurf.spt"</scriptWhenChecked> | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gx/1gxh_consurf.spt"</scriptWhenChecked> |
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
| Line 18: | Line 19: | ||
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1gxh ConSurf]. | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1gxh ConSurf]. | ||
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
| - | |||
| - | ==See Also== | ||
| - | *[[Colicin Immunity Protein|Colicin Immunity Protein]] | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| Line 35: | Line 33: | ||
[[Category: Inhibitor]] | [[Category: Inhibitor]] | ||
[[Category: Inhibitor protein of dnase colicin e8]] | [[Category: Inhibitor protein of dnase colicin e8]] | ||
| + | [[Category: Plasmid]] | ||
Revision as of 06:37, 3 January 2018
Colicin E8 DNAse immunity protein: Im8
| |||||||||||
