5fxf
From Proteopedia
(Difference between revisions)
m (Protected "5fxf" [edit=sysop:move=sysop]) |
|||
| Line 1: | Line 1: | ||
| - | '''Unreleased structure''' | ||
| - | + | ==Crystal structure of eugenol oxidase in complex with benzoate== | |
| + | <StructureSection load='5fxf' size='340' side='right' caption='[[5fxf]], [[Resolution|resolution]] 1.90Å' scene=''> | ||
| + | == Structural highlights == | ||
| + | <table><tr><td colspan='2'>[[5fxf]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5FXF OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5FXF FirstGlance]. <br> | ||
| + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=BEZ:BENZOIC+ACID'>BEZ</scene>, <scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr> | ||
| + | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[5fxd|5fxd]], [[5fxe|5fxe]], [[5fxp|5fxp]]</td></tr> | ||
| + | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Vanillyl-alcohol_oxidase Vanillyl-alcohol oxidase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.1.3.38 1.1.3.38] </span></td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5fxf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5fxf OCA], [http://pdbe.org/5fxf PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5fxf RCSB], [http://www.ebi.ac.uk/pdbsum/5fxf PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5fxf ProSAT]</span></td></tr> | ||
| + | </table> | ||
| + | <div style="background-color:#fffaf0;"> | ||
| + | == Publication Abstract from PubMed == | ||
| + | Eugenol oxidase (EUGO) from Rhodococcus jostii RHA1 had previously been shown to convert only a limited set of phenolic compounds. In this study, we have explored the biocatalytic potential of this flavoprotein oxidase, resulting in a broadened substrate scope and a deeper insight into its structural properties. In addition to the oxidation of vanillyl alcohol and the hydroxylation of eugenol, EUGO can efficiently catalyze the dehydrogenation of various phenolic ketones and the selective oxidation of a racemic secondary alcohol-4-(1-hydroxyethyl)-2-methoxyphenol. EUGO was also found to perform the kinetic resolution of a racemic secondary alcohol. Crystal structures of the enzyme in complexes with isoeugenol, coniferyl alcohol, vanillin, and benzoate have been determined. The catalytic center is a remarkable solvent-inaccessible cavity on the si side of the flavin cofactor. Structural comparison with vanillyl alcohol oxidase from Penicillium simplicissimum highlights a few localized changes that correlate with the selectivity of EUGO for phenolic substrates bearing relatively small p-substituents while tolerating o-methoxy substituents. | ||
| - | + | Biocatalytic Properties and Structural Analysis of Eugenol Oxidase from Rhodococcus jostii RHA1: A Versatile Oxidative Biocatalyst.,Nguyen QT, de Gonzalo G, Binda C, Rioz-Martinez A, Mattevi A, Fraaije MW Chembiochem. 2016 Jul 15;17(14):1359-66. doi: 10.1002/cbic.201600148. Epub 2016, Jun 7. PMID:27123962<ref>PMID:27123962</ref> | |
| - | + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | |
| - | + | </div> | |
| - | + | <div class="pdbe-citations 5fxf" style="background-color:#fffaf0;"></div> | |
| - | + | == References == | |
| - | [[Category: | + | <references/> |
| + | __TOC__ | ||
| + | </StructureSection> | ||
| + | [[Category: Vanillyl-alcohol oxidase]] | ||
[[Category: Binda, C]] | [[Category: Binda, C]] | ||
| - | [[Category: Martinez, A | + | [[Category: Fraaije, M W]] |
| - | [[Category: | + | [[Category: Gonzalo, G de]] |
| + | [[Category: Martinez, A R]] | ||
| + | [[Category: Mattevi, A]] | ||
| + | [[Category: Nguyen, Q T]] | ||
| + | [[Category: Biocatalysis]] | ||
| + | [[Category: Eugenol]] | ||
| + | [[Category: Kinetic resolution]] | ||
| + | [[Category: Oxidase]] | ||
| + | [[Category: Oxidoreductase]] | ||
| + | [[Category: Selective oxidation]] | ||
Revision as of 15:40, 27 July 2016
Crystal structure of eugenol oxidase in complex with benzoate
| |||||||||||
