User:Bhaskar Ganguly/MyBo HyPo
From Proteopedia
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- ''Bhaskar Ganguly'', Ph.D.; ''Sunil Kr. Rastogi'', Ph.D. | - ''Bhaskar Ganguly'', Ph.D.; ''Sunil Kr. Rastogi'', Ph.D. | ||
| - | (Note: This page may take a while to load. Your web browser must be configured to run Java for visualization of the interactive protein models or you may use the latest version of Google Chrome that has Java integrated in it. Right click on a model to download it and for access to more options. Left click and drag a model to rotate view.) | + | (Note: This page may take a while to load. Your web browser must be configured to run Java for visualization of the interactive protein models, or you may use the latest version of Google Chrome that has Java integrated in it. Right click on a model to download it and for access to more options. Left click and drag a model to rotate view.) |
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==== Putative Function ==== | ==== Putative Function ==== | ||
Photosystem II protein PsbP | Photosystem II protein PsbP | ||
| + | |||
| + | ---- | ||
| + | |||
| + | == ''M. bovis'' HP A0A083VUK1 == | ||
| + | |||
| + | <Structure load='A0A083VUK1.pdb' size='350' frame='true' align='right' caption='''M. bovis'' HP A0A083VUK1' scene='72/728008/A0a083vuk1/1' /> | ||
| + | |||
| + | ==== UniProt Description ==== | ||
| + | Hypothetical proline rich protein | ||
| + | |||
| + | ==== Sequence ==== | ||
| + | MFTGIASHAGALGAALVVLIGAAILHDGPAAADPNQDDRFLALLEKKEIPAVANVPRVID | ||
| + | AAHKVCRKLDGGMPVNDIVDGLRNDAYNIDPVMRLYPVRLTTTMTRFISAAVEIYCPNHH | ||
| + | SKMAFAMANFEPGSNEPTHRVAASTRSAVNSGSDLRASVSDMTIMSPGWREPTGAMLASV | ||
| + | LGAVRAGDPLIPNPPPIPVPPPAAQTLIPPPPIVAPPPPRPAPPQQPPPPPPEVEPPAGV | ||
| + | PQSGGAAGSGGAGSGGGGGGDGPVEPSPARPMPPGFIRLAP | ||
| + | |||
| + | ==== Length ==== | ||
| + | 281 | ||
| + | |||
| + | ==== Predicted Localization ==== | ||
| + | Outer Membrane | ||
| + | |||
| + | ==== Putative Function ==== | ||
| + | Transcriptional activator | ||
---- | ---- | ||
Revision as of 12:46, 10 April 2016
The MyBo HyPo Project
Welcome to the Mycobacterium bovis' Hypothetical Protein (MyBo HyPo) Project.
The MyBo HyPo Project aims a computational characterization of all hypothetical proteins (HPs) of M. bovis. As for now, computationally-derived models of 14 M. bovis HP UniRefs, obtained at a 90% sequence identity cut-off from the UniProt Database, are being included. These models shall be updated as and when models of better quality become available. We also plan to add models for other sequences over the coming periods of time. - Bhaskar Ganguly, Ph.D.; Sunil Kr. Rastogi, Ph.D.
(Note: This page may take a while to load. Your web browser must be configured to run Java for visualization of the interactive protein models, or you may use the latest version of Google Chrome that has Java integrated in it. Right click on a model to download it and for access to more options. Left click and drag a model to rotate view.)
Contents |
M. bovis HP A0A083W064
|
UniProt Description
Hypothetical arginine and alanine rich protein
Sequence
MARQPLEQRVARAAQAALARQRFVSAIDVLLGLGWLAPSHVDQWRQGRVDSLEQVVQANL SKITAVMAALRRWARDRGLNPSETDYVARTRDRRRLRFSVTGEDAIERAYRTHWVSPELS ERAVARQSRRPDLVVIMPVNDWSCASCGGSGDLMFLEDAGPLCLDCADLGHLVFLPSGDA ALTRRAKRASRLSAVVVRWSRARKRYERQGILVEAEALERAENECLADAEVRARRRERDE ARRANEDLRLQAEFGAAIRTLFPNCPAGRAEAIARHAATRGSGRIGRSAAGRALDPEAVR LAVAASVRHIDTSFDELLMSGVDRETARHRVGEHVEEVLRDWRATSR
Length
347
Predicted Localization
Cytoplasmic
Putative Function
Arginine decarboxylase
M. bovis HP A0A083W0M1
|
UniProt Description
Conserved hypothetical alanine rich protein
Sequence
MSTFRECRSMFDAAVKSYQSGDLANARAAFGRLTVENPDMSDGWLGLLACGDHHLDTLAG AHQHSEALYSETRRVGLTDGELSAVVMAPMYLGLRVWSRATIGLAYASALIIADRHDEAA ATLDDPVITEDTGAAQYRQFVMATLFHKTRSWSNLLKVTEISPPSGATDVRDEVADAVAA LASTAAASLGQFQFALELAEQVSTTNPRVTADVTLTRAWCLRELGDDDAARVALSATTTG DAPRTNTTAEQAGSPQPKFRHPYDDGRDLLVARRRPPAGDGWRKAVTKMTFGRVNPEPSA KREQTDELIQRICAPLADVHKLAFVSAKGGVGKTTMTVLVGNAVARLRGDRVMAVDVDAD LGDLSARFSERGGPQTNIEHFVSSQHTKRYADVRVHTVMNKDRLEMLGAQNDPRSTYKFG PEDYGAAMQILETHCNVILLDCGTPVNGPLFSNILNDVTGLVVVASEDVRGVEGALVTLD WLGAHGFGRLLQHTVVVLNAIQKTRSLVDCGAAENQFRKRVPDFFRIPYDPHLATGLAVD FSSLKRRTRNAVLDLAGGLAQHYPASRVRPRGEDSWKTWIETMRQVG
Length
587
Predicted Localization
Cytoplasmic
Putative Function
Cell Division Inhibitor MIND
M. bovis HP A0A0C7DGT6
|
UniProt Description
Conserved hypothetical alanine and proline rich protein
Sequence
MADRLNVAERLAEGRPAAEHTQSYVRACHLVGYQHPDLTAYPAQIHDWYGSEDGLDLHAL DADCAQLRAAASVLMEALRMERSQVAVLAAAWTGSGADAAVHFVQRHCETGNSVVTEVRA AAQRCESLRDNLWQLVDSKVATAIAIDERALAQRPAWLAAAEALTTEGADRPTAVEVVRQ QIQPYVDDDVRNDWLTTMRSTTAGVAASYDAVTDQLASAPRAHFEIPDDLGPGRQPSPAS VPAQPSATAAITPAAALPPPDPVPAVTSRPVTPSDFGSAPGDGSATPAGVGSAGGFGDAG GTGGLGGFAGLAGLANRIVDAVDSLLGSVAEQLGDPLAADNPPGAVDPFAEDAADNADDG DDAHPEEAGEAAEPKEATEPDEADEVDDADESVPAERAQDVAEEATLPPVAEPPPPAAPP VAEPPPPVAAPAPPGAPEPANGPSPEALSEGATPCEIAADELPQAGP
Length
467
Predicted Localization
Cytoplasmic
Putative Function
Undetermined
M. bovis HP A0A083VPW0
|
UniProt Description
Conserved hypothetical alanine rich protein
Sequence
MVAADLPPGRWSAVLVGAWWPAPSAALRAAAQHWATWAMQKQELARNLISQHDLLLRNQG RTAEDLIGRYLRGAKSEVTKAEKYEIKKGAFNTAADAIDYLRSRLTGIAGEGNKEIDDVL ASKKPLPEQLAEIQAIQTRCNADAANASRDAVDKVMTAMQEILEAEDIGDDPRTWARANG FNVDDAPPPRLIRENDLAALTGPGARGGSFGSVEGAGDLASPQSVGAGGFSGSGVQAACS QPAPRAIGASSRHASAGPVPPAPVVTTPAAATPPVIATGPRWRCPAGRCRRRPSDRAYRL RRLGNRLRPGW
Length
311
Predicted Localization
Outer Membrane
Putative Function
Rhamnosidase
M. bovis HP A0A083VTH6
|
UniProt Description
Hypothetical alanine and valine rich protein
Sequence
MSPHRAVIEAGPGAIRRLCCGADVVADTAVSAAALAAIDDQVALLDERPVAVDSLWFDAL RSVAVDHRDGPVVVHPSWWSAARVEVVTAAARTLTRDVVVHPRSWLLRQASSGVSAATVV VEIAERLVLVAGAEVAAVARRTDAESVAGQVGSVIARMTRGITAVVLIDVPSTVAGAAAL AAAIAGAVRGTGSSVVEIDGVRLARLARAALPPSDEPADPAARPATRSRVPTLARVAAAG VALALLAPAAVVRHGATTLQRPPTTLLVEGRVALTIPADWSTQRVVSGPGSARVQVTSPA DPEVALHVTQSPVPGETLPGTAQRLKRAIDASPAGVFVDFNPSDIRAGRPAVTYREVRAG HQVRWTILLDGAVRISVGCQSGPGHEDLLREVCAQAVRSVHAVG
Length
404
Predicted Localization
Outer Membrane
Putative Function
Photosystem II protein PsbP
M. bovis HP A0A083VUK1
|
UniProt Description
Hypothetical proline rich protein
Sequence
MFTGIASHAGALGAALVVLIGAAILHDGPAAADPNQDDRFLALLEKKEIPAVANVPRVID AAHKVCRKLDGGMPVNDIVDGLRNDAYNIDPVMRLYPVRLTTTMTRFISAAVEIYCPNHH SKMAFAMANFEPGSNEPTHRVAASTRSAVNSGSDLRASVSDMTIMSPGWREPTGAMLASV LGAVRAGDPLIPNPPPIPVPPPAAQTLIPPPPIVAPPPPRPAPPQQPPPPPPEVEPPAGV PQSGGAAGSGGAGSGGGGGGDGPVEPSPARPMPPGFIRLAP
Length
281
Predicted Localization
Outer Membrane
Putative Function
Transcriptional activator
