5j5r

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m (Protected "5j5r" [edit=sysop:move=sysop])
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'''Unreleased structure'''
 
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The entry 5j5r is ON HOLD until Paper Publication
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==M. thermoresistible GuaB2 delta-CBS in complex with inhibitor VCC234718==
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<StructureSection load='5j5r' size='340' side='right' caption='[[5j5r]], [[Resolution|resolution]] 1.60&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[5j5r]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5J5R OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5J5R FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=6G1:CYCLOHEXYL{4-[(ISOQUINOLIN-5-YL)SULFONYL]PIPERAZIN-1-YL}METHANONE'>6G1</scene>, <scene name='pdbligand=IMP:INOSINIC+ACID'>IMP</scene></td></tr>
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<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/IMP_dehydrogenase IMP dehydrogenase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.1.1.205 1.1.1.205] </span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5j5r FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5j5r OCA], [http://pdbe.org/5j5r PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5j5r RCSB], [http://www.ebi.ac.uk/pdbsum/5j5r PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5j5r ProSAT]</span></td></tr>
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</table>
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== Function ==
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[[http://www.uniprot.org/uniprot/G7CNL4_MYCT3 G7CNL4_MYCT3]] Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth.[HAMAP-Rule:MF_01964]
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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VCC234718, a molecule with growth inhibitory activity against Mycobacterium tuberculosis (Mtb), was identified by phenotypic screening of a 15344-compound library. Sequencing of a VCC234718-resistant mutant identified a Y487C substitution in the inosine monophosphate dehydrogenase, GuaB2, which was subsequently validated to be the primary molecular target of VCC234718 in Mtb. VCC234718 inhibits Mtb GuaB2 with a Ki of 100 nM and is uncompetitive with respect to IMP and NAD+. This compound binds at the NAD+ site, after IMP has bound, and makes direct interactions with IMP; therefore, the inhibitor is by definition uncompetitive. VCC234718 forms strong pi interactions with the Y487 residue side chain from the adjacent protomer in the tetramer, explaining the resistance-conferring mutation. In addition to sensitizing Mtb to VCC234718, depletion of GuaB2 was bactericidal in Mtb in vitro and in macrophages. When supplied at a high concentration (&gt;/=125 muM), guanine alleviated the toxicity of VCC234718 treatment or GuaB2 depletion via purine salvage. However, transcriptional silencing of guaB2 prevented Mtb from establishing an infection in mice, confirming that Mtb has limited access to guanine in this animal model. Together, these data provide compelling validation of GuaB2 as a new tuberculosis drug target.
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Authors: Pacitto, A., Ascher, D.B., Blundell, T.L.
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The Inosine Monophosphate Dehydrogenase, GuaB2, Is a Vulnerable New Bactericidal Drug Target for Tuberculosis.,Singh V, Donini S, Pacitto A, Sala C, Hartkoorn RC, Dhar N, Keri G, Ascher DB, Mondesert G, Vocat A, Lupien A, Sommer R, Vermet H, Lagrange S, Buechler J, Warner DF, McKinney JD, Pato J, Cole ST, Blundell TL, Rizzi M, Mizrahi V ACS Infect Dis. 2016 Sep 8. PMID:27726334<ref>PMID:27726334</ref>
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Description: M. thermoresistible GuaB2 delta-CBS in complex with inhibitor VCC234718
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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[[Category: Unreleased Structures]]
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</div>
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<div class="pdbe-citations 5j5r" style="background-color:#fffaf0;"></div>
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== References ==
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<references/>
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__TOC__
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</StructureSection>
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[[Category: IMP dehydrogenase]]
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[[Category: Ascher, D B]]
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[[Category: Blundell, T L]]
[[Category: Pacitto, A]]
[[Category: Pacitto, A]]
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[[Category: Blundell, T.L]]
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[[Category: Guab2]]
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[[Category: Ascher, D.B]]
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[[Category: Impdh]]
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[[Category: Inhibitor]]
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[[Category: Mycobacterium]]
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[[Category: Oxidoreductase]]

Revision as of 17:18, 19 October 2016

M. thermoresistible GuaB2 delta-CBS in complex with inhibitor VCC234718

5j5r, resolution 1.60Å

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