1i3v

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
[[Image:1i3v.gif|left|200px]]
[[Image:1i3v.gif|left|200px]]
-
{{Structure
+
<!--
-
|PDB= 1i3v |SIZE=350|CAPTION= <scene name='initialview01'>1i3v</scene>, resolution 2.03&Aring;
+
The line below this paragraph, containing "STRUCTURE_1i3v", creates the "Structure Box" on the page.
-
|SITE=
+
You may change the PDB parameter (which sets the PDB file loaded into the applet)
-
|LIGAND=
+
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
-
|ACTIVITY=
+
or leave the SCENE parameter empty for the default display.
-
|GENE=
+
-->
-
|DOMAIN=
+
{{STRUCTURE_1i3v| PDB=1i3v | SCENE= }}
-
|RELATEDENTRY=[[1i3u|1I3U]]
+
-
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1i3v FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1i3v OCA], [http://www.ebi.ac.uk/pdbsum/1i3v PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1i3v RCSB]</span>
+
-
}}
+
'''THREE-DIMENSIONAL STRUCTURE OF A LAMA VHH DOMAIN UNLIGANDED'''
'''THREE-DIMENSIONAL STRUCTURE OF A LAMA VHH DOMAIN UNLIGANDED'''
Line 19: Line 16:
==About this Structure==
==About this Structure==
-
1I3V is a [[Protein complex]] structure of sequences from [http://en.wikipedia.org/wiki/Lama_glama Lama glama]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1I3V OCA].
+
Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1I3V OCA].
==Reference==
==Reference==
Lateral recognition of a dye hapten by a llama VHH domain., Spinelli S, Tegoni M, Frenken L, van Vliet C, Cambillau C, J Mol Biol. 2001 Aug 3;311(1):123-9. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/11469862 11469862]
Lateral recognition of a dye hapten by a llama VHH domain., Spinelli S, Tegoni M, Frenken L, van Vliet C, Cambillau C, J Mol Biol. 2001 Aug 3;311(1):123-9. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/11469862 11469862]
-
[[Category: Lama glama]]
 
-
[[Category: Protein complex]]
 
[[Category: Cambillau, C.]]
[[Category: Cambillau, C.]]
[[Category: Frenken, L.]]
[[Category: Frenken, L.]]
Line 30: Line 25:
[[Category: Tegoni, M.]]
[[Category: Tegoni, M.]]
[[Category: Vliet, C van.]]
[[Category: Vliet, C van.]]
-
[[Category: antibody]]
+
[[Category: Antibody]]
-
[[Category: domain vhh]]
+
[[Category: Domain vhh]]
-
[[Category: lama]]
+
[[Category: Lama]]
-
 
+
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Fri May 2 19:32:29 2008''
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Mar 30 21:14:14 2008''
+

Revision as of 16:32, 2 May 2008

Template:STRUCTURE 1i3v

THREE-DIMENSIONAL STRUCTURE OF A LAMA VHH DOMAIN UNLIGANDED


Overview

Camelids, camels and llamas, have a unique immune system able to produce heavy-chain only antibodies. Their VH domains (VHHs) are the smallest binding units produced by immune systems, and therefore suitable for biotechnological applications through heterologous expression. The recognition of protein antigens by these VHHs is rather well documented, while less is known about the VHH/hapten interactions. The recently reported X-ray structure of a VHH in complex with a copper-containing azo-dye settled the ability of VHH to recognize haptens by forming a cavity between the three complementarity-determining regions (CDR). Here we report the structures of a VHH (VHH A52) free or complexed with an azo-dye, RR1, without metal ion. The structure of the complex illustrates the involvement of CDR2, CDR3 and a framework residue in a lateral interaction with the hapten. Such a lateral combining site is comparable to that found in classical antibodies, although in the absence of the VL.

About this Structure

Full crystallographic information is available from OCA.

Reference

Lateral recognition of a dye hapten by a llama VHH domain., Spinelli S, Tegoni M, Frenken L, van Vliet C, Cambillau C, J Mol Biol. 2001 Aug 3;311(1):123-9. PMID:11469862 Page seeded by OCA on Fri May 2 19:32:29 2008

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools