1ikp

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
[[Image:1ikp.jpg|left|200px]]
[[Image:1ikp.jpg|left|200px]]
-
{{Structure
+
<!--
-
|PDB= 1ikp |SIZE=350|CAPTION= <scene name='initialview01'>1ikp</scene>, resolution 1.45&Aring;
+
The line below this paragraph, containing "STRUCTURE_1ikp", creates the "Structure Box" on the page.
-
|SITE=
+
You may change the PDB parameter (which sets the PDB file loaded into the applet)
-
|LIGAND= <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>
+
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
-
|ACTIVITY=
+
or leave the SCENE parameter empty for the default display.
-
|GENE= PE ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=287 Pseudomonas aeruginosa])
+
-->
-
|DOMAIN=
+
{{STRUCTURE_1ikp| PDB=1ikp | SCENE= }}
-
|RELATEDENTRY=[[1aer|1AER]], [[1dma|1DMA]], [[1ikq|1ikq]]
+
-
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1ikp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ikp OCA], [http://www.ebi.ac.uk/pdbsum/1ikp PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1ikp RCSB]</span>
+
-
}}
+
'''Pseudomonas Aeruginosa Exotoxin A, P201Q, W281A mutant'''
'''Pseudomonas Aeruginosa Exotoxin A, P201Q, W281A mutant'''
Line 28: Line 25:
[[Category: Trame, C B.]]
[[Category: Trame, C B.]]
[[Category: Wedekind, J E.]]
[[Category: Wedekind, J E.]]
-
[[Category: all 3 exotoxin a domain]]
+
[[Category: All 3 exotoxin a domain]]
-
 
+
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Fri May 2 20:06:26 2008''
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Mar 30 21:21:07 2008''
+

Revision as of 17:06, 2 May 2008

Template:STRUCTURE 1ikp

Pseudomonas Aeruginosa Exotoxin A, P201Q, W281A mutant


Overview

Exotoxin A of Pseudomonas aeruginosa asserts its cellular toxicity through ADP-ribosylation of translation elongation factor 2, predicated on binding to specific cell surface receptors and intracellular trafficking via a complex pathway that ultimately results in translocation of an enzymatic activity into the cytoplasm. In early work, the crystallographic structure of exotoxin A was determined to 3.0 A resolution, revealing a tertiary fold having three distinct structural domains; subsequent work has shown that the domains are individually responsible for the receptor binding (domain I), transmembrane targeting (domain II), and ADP-ribosyl transferase (domain III) activities, respectively. Here, we report the structures of wild-type and W281A mutant toxin proteins at pH 8.0, refined with data to 1.62 A and 1.45 A resolution, respectively. The refined models clarify several ionic interactions within structural domains I and II that may modulate an obligatory conformational change that is induced by low pH. Proteolytic cleavage by furin is also obligatory for toxicity; the W281A mutant protein is substantially more susceptible to cleavage than the wild-type toxin. The tertiary structures of the furin cleavage sites of the wild-type and W281 mutant toxins are similar; however, the mutant toxin has significantly higher B-factors around the cleavage site, suggesting that the greater susceptibility to furin cleavage is due to increased local disorder/flexibility at the site, rather than to differences in static tertiary structure. Comparison of the refined structures of full-length toxin, which lacks ADP-ribosyl transferase activity, to that of the enzymatic domain alone reveals a salt bridge between Arg467 of the catalytic domain and Glu348 of domain II that restrains the substrate binding cleft in a conformation that precludes NAD+ binding. The refined structures of exotoxin A provide precise models for the design and interpretation of further studies of the mechanism of intoxication.

About this Structure

1IKP is a Single protein structure of sequence from Pseudomonas aeruginosa. Full crystallographic information is available from OCA.

Reference

Refined crystallographic structure of Pseudomonas aeruginosa exotoxin A and its implications for the molecular mechanism of toxicity., Wedekind JE, Trame CB, Dorywalska M, Koehl P, Raschke TM, McKee M, FitzGerald D, Collier RJ, McKay DB, J Mol Biol. 2001 Dec 7;314(4):823-37. PMID:11734000 Page seeded by OCA on Fri May 2 20:06:26 2008

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools