This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


5djq

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
==The structure of CBB3 cytochrome oxidase.==
==The structure of CBB3 cytochrome oxidase.==
-
<StructureSection load='5djq' size='340' side='right' caption='[[5djq]], [[Resolution|resolution]] 3.20&Aring;' scene=''>
+
<StructureSection load='5djq' size='340' side='right'caption='[[5djq]], [[Resolution|resolution]] 3.20&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[5djq]] is a 16 chain structure with sequence from [http://en.wikipedia.org/wiki/Pseudomonas_stutzeri Pseudomonas stutzeri] and [http://en.wikipedia.org/wiki/Pseudomonas_stutzeri_atcc_14405_=_ccug_16156 Pseudomonas stutzeri atcc 14405 = ccug 16156]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5DJQ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5DJQ FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[5djq]] is a 16 chain structure with sequence from [http://en.wikipedia.org/wiki/Pseudomonas_stutzeri Pseudomonas stutzeri] and [http://en.wikipedia.org/wiki/Pseudomonas_stutzeri_atcc_14405_=_ccug_16156 Pseudomonas stutzeri atcc 14405 = ccug 16156]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5DJQ OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=5DJQ FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CU:COPPER+(II)+ION'>CU</scene>, <scene name='pdbligand=FC6:HEXACYANOFERRATE(3-)'>FC6</scene>, <scene name='pdbligand=HEC:HEME+C'>HEC</scene>, <scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>, <scene name='pdbligand=PEO:HYDROGEN+PEROXIDE'>PEO</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CU:COPPER+(II)+ION'>CU</scene>, <scene name='pdbligand=FC6:HEXACYANOFERRATE(3-)'>FC6</scene>, <scene name='pdbligand=HEC:HEME+C'>HEC</scene>, <scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>, <scene name='pdbligand=PEO:HYDROGEN+PEROXIDE'>PEO</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3mk7|3mk7]]</td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3mk7|3mk7]]</td></tr>
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Cytochrome-c_oxidase Cytochrome-c oxidase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.9.3.1 1.9.3.1] </span></td></tr>
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Cytochrome-c_oxidase Cytochrome-c oxidase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.9.3.1 1.9.3.1] </span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5djq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5djq OCA], [http://pdbe.org/5djq PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5djq RCSB], [http://www.ebi.ac.uk/pdbsum/5djq PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5djq ProSAT]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=5djq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5djq OCA], [http://pdbe.org/5djq PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5djq RCSB], [http://www.ebi.ac.uk/pdbsum/5djq PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5djq ProSAT]</span></td></tr>
</table>
</table>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
Line 18: Line 18:
</div>
</div>
<div class="pdbe-citations 5djq" style="background-color:#fffaf0;"></div>
<div class="pdbe-citations 5djq" style="background-color:#fffaf0;"></div>
 +
 +
==See Also==
 +
*[[Cytochrome c oxidase 3D structures|Cytochrome c oxidase 3D structures]]
== References ==
== References ==
<references/>
<references/>
Line 23: Line 26:
</StructureSection>
</StructureSection>
[[Category: Cytochrome-c oxidase]]
[[Category: Cytochrome-c oxidase]]
 +
[[Category: Large Structures]]
[[Category: Pseudomonas stutzeri]]
[[Category: Pseudomonas stutzeri]]
[[Category: Pseudomonas stutzeri atcc 14405 = ccug 16156]]
[[Category: Pseudomonas stutzeri atcc 14405 = ccug 16156]]

Revision as of 08:06, 8 April 2020

The structure of CBB3 cytochrome oxidase.

PDB ID 5djq

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/5djq"
Personal tools