5lkh

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "5lkh" [edit=sysop:move=sysop])
Line 1: Line 1:
-
'''Unreleased structure'''
 
-
The entry 5lkh is ON HOLD
+
==Cryo-EM structure of the Tc toxin TcdA1 in its pore state (obtained by flexible fitting)==
 +
<StructureSection load='5lkh' size='340' side='right' caption='[[5lkh]], [[Resolution|resolution]] 3.46&Aring;' scene=''>
 +
== Structural highlights ==
 +
<table><tr><td colspan='2'>[[5lkh]] is a 5 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5LKH OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5LKH FirstGlance]. <br>
 +
</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[5lki|5lki]]</td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5lkh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5lkh OCA], [http://pdbe.org/5lkh PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5lkh RCSB], [http://www.ebi.ac.uk/pdbsum/5lkh PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5lkh ProSAT]</span></td></tr>
 +
</table>
 +
<div style="background-color:#fffaf0;">
 +
== Publication Abstract from PubMed ==
 +
Tc toxins from pathogenic bacteria use a special syringe-like mechanism to perforate the host cell membrane and inject a deadly enzyme into the host cytosol. The molecular mechanism of this unusual injection system is poorly understood. Using electron cryomicroscopy, we determined the structure of TcdA1 from Photorhabdus luminescens embedded in lipid nanodiscs. In our structure, compared with the previous structure of TcdA1 in the prepore state, the transmembrane helices rearrange in the membrane and open the initially closed pore. However, the helices do not span the complete membrane; instead, the loops connecting the helices form the rim of the funnel. Lipid head groups reach into the space between the loops and consequently stabilize the pore conformation. The linker domain is folded and packed into a pocket formed by the other domains of the toxin, thereby considerably contributing to stabilization of the pore state.
-
Authors: Gatsogiannis, C., Merino, F., Prumbaum, D., Roderer, D., Leidreiter, F., Meusch, D., Raunser, S.
+
Membrane insertion of a Tc toxin in near-atomic detail.,Gatsogiannis C, Merino F, Prumbaum D, Roderer D, Leidreiter F, Meusch D, Raunser S Nat Struct Mol Biol. 2016 Aug 29. doi: 10.1038/nsmb.3281. PMID:27571177<ref>PMID:27571177</ref>
-
Description: Cryo-EM structure of the Tc toxin TcdA1 in its pore state
+
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
-
[[Category: Unreleased Structures]]
+
</div>
 +
<div class="pdbe-citations 5lkh" style="background-color:#fffaf0;"></div>
 +
== References ==
 +
<references/>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Gatsogiannis, C]]
[[Category: Leidreiter, F]]
[[Category: Leidreiter, F]]
-
[[Category: Roderer, D]]
 
-
[[Category: Prumbaum, D]]
 
[[Category: Merino, F]]
[[Category: Merino, F]]
[[Category: Meusch, D]]
[[Category: Meusch, D]]
-
[[Category: Gatsogiannis, C]]
+
[[Category: Prumbaum, D]]
[[Category: Raunser, S]]
[[Category: Raunser, S]]
 +
[[Category: Roderer, D]]
 +
[[Category: Injection]]
 +
[[Category: Nanodisc]]
 +
[[Category: Pore-forming]]
 +
[[Category: Toxin]]

Revision as of 04:58, 9 September 2016

Cryo-EM structure of the Tc toxin TcdA1 in its pore state (obtained by flexible fitting)

5lkh, resolution 3.46Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools