1kck

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[[Image:1kck.jpg|left|200px]]
[[Image:1kck.jpg|left|200px]]
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{{Structure
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<!--
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|PDB= 1kck |SIZE=350|CAPTION= <scene name='initialview01'>1kck</scene>, resolution 2.43&Aring;
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The line below this paragraph, containing "STRUCTURE_1kck", creates the "Structure Box" on the page.
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|SITE=
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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|LIGAND= <scene name='pdbligand=ADH:1-AMINO-2,3-DIHYDROXY-5-HYDROXYMETHYL+CYCLOHEX-5-ENE'>ADH</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=G6D:6-DEOXY-ALPHA-D-GLUCOSE'>G6D</scene>, <scene name='pdbligand=GLC:GLUCOSE'>GLC</scene>
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Cyclomaltodextrin_glucanotransferase Cyclomaltodextrin glucanotransferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.4.1.19 2.4.1.19] </span>
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or leave the SCENE parameter empty for the default display.
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|GENE=
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-->
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|DOMAIN=
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{{STRUCTURE_1kck| PDB=1kck | SCENE= }}
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|RELATEDENTRY=[[1cdg|1cdg]], [[1kcl|1kcl]]
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|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1kck FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1kck OCA], [http://www.ebi.ac.uk/pdbsum/1kck PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1kck RCSB]</span>
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}}
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'''Bacillus circulans strain 251 Cyclodextrin glycosyl transferase mutant N193G'''
'''Bacillus circulans strain 251 Cyclodextrin glycosyl transferase mutant N193G'''
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[[Category: Rozeboom, H J.]]
[[Category: Rozeboom, H J.]]
[[Category: Uitdehaag, J C.M.]]
[[Category: Uitdehaag, J C.M.]]
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[[Category: acarbose]]
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[[Category: Acarbose]]
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[[Category: cylcodextrin]]
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[[Category: Cylcodextrin]]
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[[Category: glycosyl transferase]]
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[[Category: Glycosyl transferase]]
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[[Category: transferase]]
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[[Category: Transferase]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Fri May 2 22:34:29 2008''
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Mar 30 21:46:33 2008''
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Revision as of 19:34, 2 May 2008

Template:STRUCTURE 1kck

Bacillus circulans strain 251 Cyclodextrin glycosyl transferase mutant N193G


Overview

Cyclodextrin-glycosyltransferase (CGTase) catalyzes the formation of alpha-, beta-, and gamma-cyclodextrins (cyclic alpha-(1,4)-linked oligosaccharides of 6, 7, or 8 glucose residues, respectively) from starch. Nine substrate binding subsites were observed in an x-ray structure of the CGTase from Bacillus circulans strain 251 complexed with a maltononaose substrate. Subsite -6 is conserved in CGTases, suggesting its importance for the reactions catalyzed by the enzyme. To investigate this in detail, we made six mutant CGTases (Y167F, G179L, G180L, N193G, N193L, and G179L/G180L). All subsite -6 mutants had decreased k(cat) values for beta-cyclodextrin formation, as well as for the disproportionation and coupling reactions, but not for hydrolysis. Especially G179L, G180L, and G179L/G180L affected the transglycosylation activities, most prominently for the coupling reactions. The results demonstrate that (i) subsite -6 is important for all three CGTase-catalyzed transglycosylation reactions, (ii) Gly-180 is conserved because of its importance for the circularization of the linear substrates, (iii) it is possible to independently change cyclization and coupling activities, and (iv) substrate interactions at subsite -6 activate the enzyme in catalysis via an induced-fit mechanism. This article provides for the first time definite biochemical evidence for such an induced-fit mechanism in the alpha-amylase family.

About this Structure

1KCK is a Single protein structure of sequence from Bacillus circulans. Full crystallographic information is available from OCA.

Reference

The remote substrate binding subsite -6 in cyclodextrin-glycosyltransferase controls the transferase activity of the enzyme via an induced-fit mechanism., Leemhuis H, Uitdehaag JC, Rozeboom HJ, Dijkstra BW, Dijkhuizen L, J Biol Chem. 2002 Jan 11;277(2):1113-9. Epub 2001 Nov 5. PMID:11696539 Page seeded by OCA on Fri May 2 22:34:29 2008

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