This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3qr7

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
==Crystal structure of the C-terminal fragment of the bacteriophage P2 membrane-piercing protein gpV==
==Crystal structure of the C-terminal fragment of the bacteriophage P2 membrane-piercing protein gpV==
-
<StructureSection load='3qr7' size='340' side='right' caption='[[3qr7]], [[Resolution|resolution]] 0.94&Aring;' scene=''>
+
<StructureSection load='3qr7' size='340' side='right'caption='[[3qr7]], [[Resolution|resolution]] 0.94&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[3qr7]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Bpp2 Bpp2]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3QR7 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3QR7 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[3qr7]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Bpp2 Bpp2]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3QR7 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3QR7 FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=FE:FE+(III)+ION'>FE</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=FE:FE+(III)+ION'>FE</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3qr8|3qr8]]</td></tr>
+
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[3qr8|3qr8]]</div></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">V ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10679 BPP2])</td></tr>
+
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">V ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10679 BPP2])</td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3qr7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3qr7 OCA], [http://pdbe.org/3qr7 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3qr7 RCSB], [http://www.ebi.ac.uk/pdbsum/3qr7 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3qr7 ProSAT]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3qr7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3qr7 OCA], [https://pdbe.org/3qr7 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3qr7 RCSB], [https://www.ebi.ac.uk/pdbsum/3qr7 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3qr7 ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/VPV_BPP2 VPV_BPP2]] Forms the small spike at the tip of the tail.
+
[[https://www.uniprot.org/uniprot/VPV_BPP2 VPV_BPP2]] Forms the small spike at the tip of the tail.
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 25: Line 25:
</StructureSection>
</StructureSection>
[[Category: Bpp2]]
[[Category: Bpp2]]
 +
[[Category: Large Structures]]
[[Category: Browning, C]]
[[Category: Browning, C]]
[[Category: Leiman, P G]]
[[Category: Leiman, P G]]

Revision as of 06:20, 8 June 2022

Crystal structure of the C-terminal fragment of the bacteriophage P2 membrane-piercing protein gpV

PDB ID 3qr7

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools