| Structural highlights
3zys is a 6 chain structure with sequence from Human. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
| | Related: | 3zyc, 2x2f, 2dyn, 2x2e, 1dyn |
| Activity: | Dynamin GTPase, with EC number 3.6.5.5 |
| Resources: | FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT |
Function
[DYN1_HUMAN] Microtubule-associated force-producing protein involved in producing microtubule bundles and able to bind and hydrolyze GTP. Most probably involved in vesicular trafficking processes. Involved in receptor-mediated endocytosis. [MX1_HUMAN] Interferon-induced dynamin-like GTPase with antiviral activity against a wide range of RNA viruses and some DNA viruses. Its target viruses include negative-stranded RNA viruses and HBV through binding and inactivation of their ribonucleocapsid. May also antagonize reoviridae and asfarviridae replication. Inhibits thogoto virus (THOV) replication by preventing the nuclear import of viral nucleocapsids. Inhibits La Crosse virus (LACV) replication by sequestering viral nucleoprotein in perinuclear complexes, preventing genome amplification, budding, and egress. Inhibits influenza A virus (IAV) replication by decreasing or delaying NP synthesis and by blocking endocytic traffic of incoming virus particles. Enhances ER stress-mediated cell death after influenza virus infection. May regulate the calcium channel activity of TRPCs.[1] [2] [3] [4] [5] [6] [7] [8] [9] [10] [11] [12] [13] [14]
Publication Abstract from PubMed
The GTPase dynamin catalyzes membrane fission by forming a collar around the necks of clathrin-coated pits, but the specific structural interactions and conformational changes that drive this process remain a mystery. We present the GMPPCP-bound structures of the truncated human dynamin 1 helical polymer at 12.2 A and a fusion protein, GG, linking human dynamin 1's catalytic G domain to its GTPase effector domain (GED) at 2.2 A. The structures reveal the position and connectivity of dynamin fragments in the assembled structure, showing that G domain dimers only form between tetramers in sequential rungs of the dynamin helix. Using chemical crosslinking, we demonstrate that dynamin tetramers are made of two dimers, in which the G domain of one molecule interacts in trans with the GED of another. Structural comparison of GG(GMPPCP) to the GG transition-state complex identifies a hydrolysis-dependent powerstroke that may play a role in membrane-remodeling events necessary for fission.
A pseudoatomic model of the dynamin polymer identifies a hydrolysis-dependent powerstroke.,Chappie JS, Mears JA, Fang S, Leonard M, Schmid SL, Milligan RA, Hinshaw JE, Dyda F Cell. 2011 Sep 30;147(1):209-22. PMID:21962517[15]
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.
References
- ↑ Ku CC, Che XB, Reichelt M, Rajamani J, Schaap-Nutt A, Huang KJ, Sommer MH, Chen YS, Chen YY, Arvin AM. Herpes simplex virus-1 induces expression of a novel MxA isoform that enhances viral replication. Immunol Cell Biol. 2011 Feb;89(2):173-82. doi: 10.1038/icb.2010.83. Epub 2010 Jul, 6. PMID:20603636 doi:10.1038/icb.2010.83
- ↑ Kochs G, Janzen C, Hohenberg H, Haller O. Antivirally active MxA protein sequesters La Crosse virus nucleocapsid protein into perinuclear complexes. Proc Natl Acad Sci U S A. 2002 Mar 5;99(5):3153-8. PMID:11880649 doi:10.1073/pnas.052430399
- ↑ Andersson I, Bladh L, Mousavi-Jazi M, Magnusson KE, Lundkvist A, Haller O, Mirazimi A. Human MxA protein inhibits the replication of Crimean-Congo hemorrhagic fever virus. J Virol. 2004 Apr;78(8):4323-9. PMID:15047845
- ↑ Turan K, Mibayashi M, Sugiyama K, Saito S, Numajiri A, Nagata K. Nuclear MxA proteins form a complex with influenza virus NP and inhibit the transcription of the engineered influenza virus genome. Nucleic Acids Res. 2004 Jan 29;32(2):643-52. Print 2004. PMID:14752052 doi:10.1093/nar/gkh192
- ↑ Reichelt M, Stertz S, Krijnse-Locker J, Haller O, Kochs G. Missorting of LaCrosse virus nucleocapsid protein by the interferon-induced MxA GTPase involves smooth ER membranes. Traffic. 2004 Oct;5(10):772-84. PMID:15355513 doi:10.1111/j.1600-0854.2004.00219.x
- ↑ Bridgen A, Dalrymple DA, Weber F, Elliott RM. Inhibition of Dugbe nairovirus replication by human MxA protein. Virus Res. 2004 Jan;99(1):47-50. PMID:14687945
- ↑ Lussier MP, Cayouette S, Lepage PK, Bernier CL, Francoeur N, St-Hilaire M, Pinard M, Boulay G. MxA, a member of the dynamin superfamily, interacts with the ankyrin-like repeat domain of TRPC. J Biol Chem. 2005 May 13;280(19):19393-400. Epub 2005 Mar 9. PMID:15757897 doi:10.1074/jbc.M500391200
- ↑ Kochs G, Reichelt M, Danino D, Hinshaw JE, Haller O. Assay and functional analysis of dynamin-like Mx proteins. Methods Enzymol. 2005;404:632-43. PMID:16413306 doi:10.1016/S0076-6879(05)04055-3
- ↑ Leroy M, Pire G, Baise E, Desmecht D. Expression of the interferon-alpha/beta-inducible bovine Mx1 dynamin interferes with replication of rabies virus. Neurobiol Dis. 2006 Mar;21(3):515-21. Epub 2005 Oct 3. PMID:16202617 doi:10.1016/j.nbd.2005.08.015
- ↑ Mundt E. Human MxA protein confers resistance to double-stranded RNA viruses of two virus families. J Gen Virol. 2007 Apr;88(Pt 4):1319-23. PMID:17374778 doi:10.1099/vir.0.82526-0
- ↑ Yu Z, Wang Z, Chen J, Li H, Lin Z, Zhang F, Zhou Y, Hou J. GTPase activity is not essential for the interferon-inducible MxA protein to inhibit the replication of hepatitis B virus. Arch Virol. 2008;153(9):1677-84. doi: 10.1007/s00705-008-0168-9. Epub 2008 Aug 1. PMID:18668195 doi:10.1007/s00705-008-0168-9
- ↑ Netherton CL, Simpson J, Haller O, Wileman TE, Takamatsu HH, Monaghan P, Taylor G. Inhibition of a large double-stranded DNA virus by MxA protein. J Virol. 2009 Mar;83(5):2310-20. doi: 10.1128/JVI.00781-08. Epub 2008 Dec 24. PMID:19109387 doi:10.1128/JVI.00781-08
- ↑ von der Malsburg A, Abutbul-Ionita I, Haller O, Kochs G, Danino D. Stalk domain of the dynamin-like MxA GTPase protein mediates membrane binding and liposome tubulation via the unstructured L4 loop. J Biol Chem. 2011 Oct 28;286(43):37858-65. doi: 10.1074/jbc.M111.249037. Epub, 2011 Sep 7. PMID:21900240 doi:10.1074/jbc.M111.249037
- ↑ Numajiri Haruki A, Naito T, Nishie T, Saito S, Nagata K. Interferon-inducible antiviral protein MxA enhances cell death triggered by endoplasmic reticulum stress. J Interferon Cytokine Res. 2011 Nov;31(11):847-56. doi: 10.1089/jir.2010.0132., Epub 2011 Oct 12. PMID:21992152 doi:10.1089/jir.2010.0132
- ↑ Chappie JS, Mears JA, Fang S, Leonard M, Schmid SL, Milligan RA, Hinshaw JE, Dyda F. A pseudoatomic model of the dynamin polymer identifies a hydrolysis-dependent powerstroke. Cell. 2011 Sep 30;147(1):209-22. PMID:21962517 doi:10.1016/j.cell.2011.09.003
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