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3sdt
From Proteopedia
(Difference between revisions)
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==Structure of a three-domain sesquiterpene synthase: a prospective target for advanced biofuels production== | ==Structure of a three-domain sesquiterpene synthase: a prospective target for advanced biofuels production== | ||
| - | <StructureSection load='3sdt' size='340' side='right' caption='[[3sdt]], [[Resolution|resolution]] 1.89Å' scene=''> | + | <StructureSection load='3sdt' size='340' side='right'caption='[[3sdt]], [[Resolution|resolution]] 1.89Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[3sdt]] is a 1 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[3sdt]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Abigr Abigr]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3SDT OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3SDT FirstGlance]. <br> |
| - | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=AHD:4-AMINO-1-HYDROXYBUTANE-1,1-DIYLDIPHOSPHONATE'>AHD</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr> | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=AHD:4-AMINO-1-HYDROXYBUTANE-1,1-DIYLDIPHOSPHONATE'>AHD</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr> |
| - | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3sae|3sae]], [[3sdq|3sdq]], [[3sdr|3sdr]], [[3sdu|3sdu]], [[3sdv|3sdv]]</td></tr> | + | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[3sae|3sae]], [[3sdq|3sdq]], [[3sdr|3sdr]], [[3sdu|3sdu]], [[3sdv|3sdv]]</div></td></tr> |
| - | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">ag1 ([ | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">ag1 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=46611 ABIGR])</td></tr> |
| - | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Alpha-bisabolene_synthase Alpha-bisabolene synthase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.2.3.38 4.2.3.38] </span></td></tr> |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3sdt FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3sdt OCA], [https://pdbe.org/3sdt PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3sdt RCSB], [https://www.ebi.ac.uk/pdbsum/3sdt PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3sdt ProSAT]</span></td></tr> |
</table> | </table> | ||
== Function == | == Function == | ||
| - | [[ | + | [[https://www.uniprot.org/uniprot/TPSD1_ABIGR TPSD1_ABIGR]] Involved in defensive oleoresin formation in conifers in response to insect attack or other injury. Involved in sesquiterpene (C15) olefins biosynthesis.<ref>PMID:9539701</ref> |
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
== Publication Abstract from PubMed == | == Publication Abstract from PubMed == | ||
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[[Category: Abigr]] | [[Category: Abigr]] | ||
[[Category: Alpha-bisabolene synthase]] | [[Category: Alpha-bisabolene synthase]] | ||
| + | [[Category: Large Structures]] | ||
[[Category: Adams, P D]] | [[Category: Adams, P D]] | ||
[[Category: DeGiovanni, A]] | [[Category: DeGiovanni, A]] | ||
Revision as of 07:52, 29 June 2022
Structure of a three-domain sesquiterpene synthase: a prospective target for advanced biofuels production
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