1l9h

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
[[Image:1l9h.gif|left|200px]]
[[Image:1l9h.gif|left|200px]]
-
{{Structure
+
<!--
-
|PDB= 1l9h |SIZE=350|CAPTION= <scene name='initialview01'>1l9h</scene>, resolution 2.6&Aring;
+
The line below this paragraph, containing "STRUCTURE_1l9h", creates the "Structure Box" on the page.
-
|SITE=
+
You may change the PDB parameter (which sets the PDB file loaded into the applet)
-
|LIGAND= <scene name='pdbligand=ACE:ACETYL+GROUP'>ACE</scene>, <scene name='pdbligand=BNG:B-NONYLGLUCOSIDE'>BNG</scene>, <scene name='pdbligand=HG:MERCURY+(II)+ION'>HG</scene>, <scene name='pdbligand=HTO:HEPTANE-1,2,3-TRIOL'>HTO</scene>, <scene name='pdbligand=MAN:ALPHA-D-MANNOSE'>MAN</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=PLM:PALMITIC+ACID'>PLM</scene>, <scene name='pdbligand=RET:RETINAL'>RET</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene>
+
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
-
|ACTIVITY=
+
or leave the SCENE parameter empty for the default display.
-
|GENE=
+
-->
-
|DOMAIN=
+
{{STRUCTURE_1l9h| PDB=1l9h | SCENE= }}
-
|RELATEDENTRY=[[1f88|1F88]], [[1hzx|1HZX]]
+
-
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1l9h FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1l9h OCA], [http://www.ebi.ac.uk/pdbsum/1l9h PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1l9h RCSB]</span>
+
-
}}
+
'''Crystal structure of bovine rhodopsin at 2.6 angstroms RESOLUTION'''
'''Crystal structure of bovine rhodopsin at 2.6 angstroms RESOLUTION'''
Line 31: Line 28:
[[Category: Shichida, Y.]]
[[Category: Shichida, Y.]]
[[Category: Silow, M.]]
[[Category: Silow, M.]]
-
[[Category: g protein-coupled receptor]]
+
[[Category: G protein-coupled receptor]]
-
[[Category: membrane protein]]
+
[[Category: Membrane protein]]
-
[[Category: photoreceptor]]
+
[[Category: Photoreceptor]]
-
[[Category: retinal protein]]
+
[[Category: Retinal protein]]
-
 
+
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Fri May 2 23:41:42 2008''
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Mar 30 21:59:56 2008''
+

Revision as of 20:41, 2 May 2008

Template:STRUCTURE 1l9h

Crystal structure of bovine rhodopsin at 2.6 angstroms RESOLUTION


Overview

Activation of G protein-coupled receptors (GPCRs) is triggered and regulated by structural rearrangement of the transmembrane heptahelical bundle containing a number of highly conserved residues. In rhodopsin, a prototypical GPCR, the helical bundle accommodates an intrinsic inverse-agonist 11-cis-retinal, which undergoes photo-isomerization to the all-trans form upon light absorption. Such a trigger by the chromophore corresponds to binding of a diffusible ligand to other GPCRs. Here we have explored the functional role of water molecules in the transmembrane region of bovine rhodopsin by using x-ray diffraction to 2.6 A. The structural model suggests that water molecules, which were observed in the vicinity of highly conserved residues and in the retinal pocket, regulate the activity of rhodopsin-like GPCRs and spectral tuning in visual pigments, respectively. To confirm the physiological relevance of the structural findings, we conducted single-crystal microspectrophotometry on rhodopsin packed in our three-dimensional crystals and show that its spectroscopic properties are similar to those previously found by using bovine rhodopsin in suspension or membrane environment.

About this Structure

1L9H is a Single protein structure of sequence from Bos taurus. Full crystallographic information is available from OCA.

Reference

Functional role of internal water molecules in rhodopsin revealed by X-ray crystallography., Okada T, Fujiyoshi Y, Silow M, Navarro J, Landau EM, Shichida Y, Proc Natl Acad Sci U S A. 2002 Apr 30;99(9):5982-7. Epub 2002 Apr 23. PMID:11972040 Page seeded by OCA on Fri May 2 23:41:42 2008

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools