3nv0
From Proteopedia
(Difference between revisions)
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==Crystal structure and mutational analysis of the NXF2/NXT1 heterodimeric complex from caenorhabditis elegans at 1.84 A resolution== | ==Crystal structure and mutational analysis of the NXF2/NXT1 heterodimeric complex from caenorhabditis elegans at 1.84 A resolution== | ||
- | <StructureSection load='3nv0' size='340' side='right' caption='[[3nv0]], [[Resolution|resolution]] 1.84Å' scene=''> | + | <StructureSection load='3nv0' size='340' side='right'caption='[[3nv0]], [[Resolution|resolution]] 1.84Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
- | <table><tr><td colspan='2'>[[3nv0]] is a 2 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[3nv0]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Caeel Caeel]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3NV0 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3NV0 FirstGlance]. <br> |
- | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=BME:BETA-MERCAPTOETHANOL'>BME</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene></td></tr> | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BME:BETA-MERCAPTOETHANOL'>BME</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene></td></tr> |
- | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">C15H11.6, nxf-2 ([ | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">C15H11.6, nxf-2 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=6239 CAEEL]), nxt-1, nxt1, Y71F9AM.5 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=6239 CAEEL])</td></tr> |
- | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3nv0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3nv0 OCA], [https://pdbe.org/3nv0 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3nv0 RCSB], [https://www.ebi.ac.uk/pdbsum/3nv0 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3nv0 ProSAT]</span></td></tr> |
</table> | </table> | ||
== Function == | == Function == | ||
- | [[ | + | [[https://www.uniprot.org/uniprot/NXF2_CAEEL NXF2_CAEEL]] May be involved in the export of cellular mRNA to the cytoplasm (By similarity). [[https://www.uniprot.org/uniprot/NXT1_CAEEL NXT1_CAEEL]] Stimulator of protein export for NES-containing proteins. Also plays a role in the nuclear export of U1 snRNA, tRNA, and mRNA (By similarity). |
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
== Publication Abstract from PubMed == | == Publication Abstract from PubMed == | ||
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</StructureSection> | </StructureSection> | ||
[[Category: Caeel]] | [[Category: Caeel]] | ||
+ | [[Category: Large Structures]] | ||
[[Category: Carmel, A B]] | [[Category: Carmel, A B]] | ||
[[Category: Kerkow, D E]] | [[Category: Kerkow, D E]] |
Revision as of 07:09, 12 May 2022
Crystal structure and mutational analysis of the NXF2/NXT1 heterodimeric complex from caenorhabditis elegans at 1.84 A resolution
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Categories: Caeel | Large Structures | Carmel, A B | Kerkow, D E | Williamson, J R | Beta sheet heterodimer interface | Cation-pi interaction | Intramonomer buried water | Mrna transport | Novel surface exposed pocket | Ntf2-like domain | Ntf2-plug | Nucleoporin binding pocket | Nucleus | Nxf-loop | Pi-pi interaction | Rna binding-protein transport complex | Rna-binding | Water mediated interface