This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


4h67

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
==Crystal structure of HMP synthase Thi5 from S. cerevisiae==
==Crystal structure of HMP synthase Thi5 from S. cerevisiae==
-
<StructureSection load='4h67' size='340' side='right' caption='[[4h67]], [[Resolution|resolution]] 2.70&Aring;' scene=''>
+
<StructureSection load='4h67' size='340' side='right'caption='[[4h67]], [[Resolution|resolution]] 2.70&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[4h67]] is a 8 chain structure with sequence from [http://en.wikipedia.org/wiki/Atcc_18824 Atcc 18824]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4H67 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4H67 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[4h67]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4H67 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4H67 FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=PLP:PYRIDOXAL-5-PHOSPHATE'>PLP</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=PLP:PYRIDOXAL-5-PHOSPHATE'>PLP</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4h65|4h65]], [[4h6d|4h6d]]</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4h67 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4h67 OCA], [https://pdbe.org/4h67 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4h67 RCSB], [https://www.ebi.ac.uk/pdbsum/4h67 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4h67 ProSAT]</span></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">THI5, YFL058W ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=4932 ATCC 18824])</td></tr>
+
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4h67 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4h67 OCA], [http://pdbe.org/4h67 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4h67 RCSB], [http://www.ebi.ac.uk/pdbsum/4h67 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4h67 ProSAT]</span></td></tr>
+
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/THI5_YEAST THI5_YEAST]] Proposed biosynthetic enzyme involved in pyrimidine biosynthesis pathway above the hydroxymethyl-pyrimidine precursor leading to the thiamine moiety.<ref>PMID:12777485</ref>
+
[https://www.uniprot.org/uniprot/THI5_YEAST THI5_YEAST] Proposed biosynthetic enzyme involved in pyrimidine biosynthesis pathway above the hydroxymethyl-pyrimidine precursor leading to the thiamine moiety.<ref>PMID:12777485</ref>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 24: Line 22:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Atcc 18824]]
+
[[Category: Large Structures]]
-
[[Category: Coquille, S C]]
+
[[Category: Saccharomyces cerevisiae]]
-
[[Category: Fitzpatrick, T]]
+
[[Category: Coquille SC]]
-
[[Category: Roux, C]]
+
[[Category: Fitzpatrick T]]
-
[[Category: Thore, S]]
+
[[Category: Roux C]]
-
[[Category: Hmp-p synthase]]
+
[[Category: Thore S]]
-
[[Category: Plp binding]]
+
-
[[Category: Thi5-plp complex]]
+
-
[[Category: Transferase]]
+

Revision as of 08:01, 3 November 2022

Crystal structure of HMP synthase Thi5 from S. cerevisiae

PDB ID 4h67

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/4h67"
Personal tools