This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


9ant

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
==ANTENNAPEDIA HOMEODOMAIN-DNA COMPLEX==
==ANTENNAPEDIA HOMEODOMAIN-DNA COMPLEX==
-
<StructureSection load='9ant' size='340' side='right' caption='[[9ant]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
+
<StructureSection load='9ant' size='340' side='right'caption='[[9ant]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[9ant]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/Drome Drome]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=9ANT OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=9ANT FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[9ant]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Drome Drome]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=9ANT OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=9ANT FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=NI:NICKEL+(II)+ION'>NI</scene></td></tr>
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NI:NICKEL+(II)+ION'>NI</scene></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=9ant FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=9ant OCA], [http://pdbe.org/9ant PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=9ant RCSB], [http://www.ebi.ac.uk/pdbsum/9ant PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=9ant ProSAT]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=9ant FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=9ant OCA], [https://pdbe.org/9ant PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=9ant RCSB], [https://www.ebi.ac.uk/pdbsum/9ant PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=9ant ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/ANTP_DROME ANTP_DROME]] Sequence-specific transcription factor which is part of a developmental regulatory system that regulates segmental identity in the mesothorax. Provides cells with specific positional identities on the anterior-posterior axis.
+
[[https://www.uniprot.org/uniprot/ANTP_DROME ANTP_DROME]] Sequence-specific transcription factor which is part of a developmental regulatory system that regulates segmental identity in the mesothorax. Provides cells with specific positional identities on the anterior-posterior axis.
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
<jmolCheckbox>
<jmolCheckbox>
-
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/an/9ant_consurf.spt"</scriptWhenChecked>
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/an/9ant_consurf.spt"</scriptWhenChecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
Line 28: Line 28:
</div>
</div>
<div class="pdbe-citations 9ant" style="background-color:#fffaf0;"></div>
<div class="pdbe-citations 9ant" style="background-color:#fffaf0;"></div>
- 
-
==See Also==
 
-
*[[User:John S. de Banzie/DNA-BindingHelixTurnHelix|User:John S. de Banzie/DNA-BindingHelixTurnHelix]]
 
== References ==
== References ==
<references/>
<references/>
Line 36: Line 33:
</StructureSection>
</StructureSection>
[[Category: Drome]]
[[Category: Drome]]
 +
[[Category: Large Structures]]
[[Category: Fraenkel, E]]
[[Category: Fraenkel, E]]
[[Category: Pabo, C O]]
[[Category: Pabo, C O]]

Revision as of 16:04, 3 November 2021

ANTENNAPEDIA HOMEODOMAIN-DNA COMPLEX

PDB ID 9ant

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools