This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


4dlk

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
==Crystal Structure of ATP-Ca++ complex of purK: N5-carboxyaminoimidazole ribonucleotide synthetase==
==Crystal Structure of ATP-Ca++ complex of purK: N5-carboxyaminoimidazole ribonucleotide synthetase==
-
<StructureSection load='4dlk' size='340' side='right' caption='[[4dlk]], [[Resolution|resolution]] 2.02&Aring;' scene=''>
+
<StructureSection load='4dlk' size='340' side='right'caption='[[4dlk]], [[Resolution|resolution]] 2.02&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[4dlk]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacaa Bacaa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4DLK OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4DLK FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[4dlk]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_anthracis_str._A0248 Bacillus anthracis str. A0248]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4DLK OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4DLK FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ATP:ADENOSINE-5-TRIPHOSPHATE'>ATP</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ATP:ADENOSINE-5-TRIPHOSPHATE'>ATP</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3q2o|3q2o]], [[3r5h|3r5h]], [[3qff|3qff]], [[3v4s|3v4s]]</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4dlk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4dlk OCA], [https://pdbe.org/4dlk PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4dlk RCSB], [https://www.ebi.ac.uk/pdbsum/4dlk PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4dlk ProSAT]</span></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">BAS0276, BA_0289, GBAA_0289, purK ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=592021 BACAA])</td></tr>
+
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Phosphoribosylaminoimidazole_carboxylase Phosphoribosylaminoimidazole carboxylase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.1.1.21 4.1.1.21] </span></td></tr>
+
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4dlk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4dlk OCA], [http://pdbe.org/4dlk PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4dlk RCSB], [http://www.ebi.ac.uk/pdbsum/4dlk PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4dlk ProSAT]</span></td></tr>
+
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/Q81ZH7_BACAN Q81ZH7_BACAN]] Catalyzes the ATP-dependent conversion of 5-aminoimidazole ribonucleotide (AIR) and HCO(3)- to N5-carboxyaminoimidazole ribonucleotide (N5-CAIR).[RuleBase:RU361200]
+
[[https://www.uniprot.org/uniprot/A0A6L8P0X7_BACAN A0A6L8P0X7_BACAN]]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 23: Line 20:
==See Also==
==See Also==
-
*[[Phosphoribosylaminoimidazole carboxylase|Phosphoribosylaminoimidazole carboxylase]]
+
*[[Phosphoribosylaminoimidazole carboxylase 3D structures|Phosphoribosylaminoimidazole carboxylase 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Bacaa]]
+
[[Category: Bacillus anthracis str. A0248]]
-
[[Category: Phosphoribosylaminoimidazole carboxylase]]
+
[[Category: Large Structures]]
-
[[Category: Fung, L W]]
+
[[Category: Fung LW]]
-
[[Category: Johnson, M E]]
+
[[Category: Johnson ME]]
-
[[Category: Santarsiero, B D]]
+
[[Category: Santarsiero BD]]
-
[[Category: Tuntland, M L]]
+
[[Category: Tuntland ML]]
-
[[Category: Atp binding]]
+
-
[[Category: Carboxylase]]
+
-
[[Category: Lyase]]
+

Revision as of 08:26, 21 September 2022

Crystal Structure of ATP-Ca++ complex of purK: N5-carboxyaminoimidazole ribonucleotide synthetase

PDB ID 4dlk

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools