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1ly8

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[[Image:1ly8.jpg|left|200px]]
[[Image:1ly8.jpg|left|200px]]
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{{Structure
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<!--
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|PDB= 1ly8 |SIZE=350|CAPTION= <scene name='initialview01'>1ly8</scene>, resolution 2.05&Aring;
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The line below this paragraph, containing "STRUCTURE_1ly8", creates the "Structure Box" on the page.
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|SITE=
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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|LIGAND= <scene name='pdbligand=BMA:BETA-D-MANNOSE'>BMA</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>, <scene name='pdbligand=MAN:ALPHA-D-MANNOSE'>MAN</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Peroxidase Peroxidase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.11.1.7 1.11.1.7] </span>
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or leave the SCENE parameter empty for the default display.
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|GENE= CIP1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=5346 Coprinopsis cinerea])
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|DOMAIN=
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{{STRUCTURE_1ly8| PDB=1ly8 | SCENE= }}
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|RELATEDENTRY=
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|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1ly8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ly8 OCA], [http://www.ebi.ac.uk/pdbsum/1ly8 PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1ly8 RCSB]</span>
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'''The crystal structure of a mutant enzyme of Coprinus cinereus peroxidase provides an understanding of its increased thermostability and insight into modelling of protein structures'''
'''The crystal structure of a mutant enzyme of Coprinus cinereus peroxidase provides an understanding of its increased thermostability and insight into modelling of protein structures'''
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[[Category: Schneider, P.]]
[[Category: Schneider, P.]]
[[Category: Svendsen, A.]]
[[Category: Svendsen, A.]]
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[[Category: coprinus cinereus]]
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[[Category: Coprinus cinereus]]
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[[Category: mutant]]
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[[Category: Mutant]]
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[[Category: peroxidase]]
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[[Category: Peroxidase]]
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[[Category: thermostability]]
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[[Category: Thermostability]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sat May 3 00:25:00 2008''
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Mar 30 22:08:53 2008''
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Revision as of 21:25, 2 May 2008

Template:STRUCTURE 1ly8

The crystal structure of a mutant enzyme of Coprinus cinereus peroxidase provides an understanding of its increased thermostability and insight into modelling of protein structures


Overview

Seven amino-acid substitutions introduced into the 343 amino-acid-long sequence of Coprinus cinereus peroxidase (CiP) led to a mutant enzyme (TS-rCiP) which is more stable than the native enzyme at higher temperature, pH and hydrogen peroxide concentrations. It is therefore more suitable for industrial applications. A structure determination was conducted on a deglycosylated but still active form of TS-rCiP based on X-ray diffraction data to 2.05 A resolution measured on a crystal cooled to 100 K and refined to R = 0.202 and R(free) = 0.249. The increased stability of the TS-rCiP enzyme can be understood from the structural changes of the TS-rCiP structure revealed by a comparative analysis with other known CiP structures. One of the more significant changes caused by three of the substitutions, I49S, V53A and T121A, is the conversion of a hydrophobic pocket into a hydrophilic pocket with associated changes in the water structure and the hydrogen-bonding interactions. The E239G substitution, which gives rise to increased thermostability at high pH, creates changes in the water structure and in the orientation of a phenylalanine (Phe236) in its vicinity. The three substitutions M166F, M242 and Y242F introduced to increase the oxidative stability do not introduce any structural changes.

About this Structure

1LY8 is a Single protein structure of sequence from Coprinopsis cinerea. Full crystallographic information is available from OCA.

Reference

The structure of a mutant enzyme of Coprinus cinereus peroxidase provides an understanding of its increased thermostability., Houborg K, Harris P, Poulsen JC, Schneider P, Svendsen A, Larsen S, Acta Crystallogr D Biol Crystallogr. 2003 Jun;59(Pt 6):997-1003. Epub 2003, May 23. PMID:12777761 Page seeded by OCA on Sat May 3 00:25:00 2008

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