3jyp

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
==Quinate dehydrogenase from Corynebacterium glutamicum in complex with quinate and NADH==
==Quinate dehydrogenase from Corynebacterium glutamicum in complex with quinate and NADH==
-
<StructureSection load='3jyp' size='340' side='right' caption='[[3jyp]], [[Resolution|resolution]] 1.16&Aring;' scene=''>
+
<StructureSection load='3jyp' size='340' side='right'caption='[[3jyp]], [[Resolution|resolution]] 1.16&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[3jyp]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Corgl Corgl]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3JYP OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3JYP FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[3jyp]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Corgl Corgl]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3JYP OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3JYP FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=NAD:NICOTINAMIDE-ADENINE-DINUCLEOTIDE'>NAD</scene>, <scene name='pdbligand=QIC:(1S,3R,4S,5R)-1,3,4,5-TETRAHYDROXYCYCLOHEXANECARBOXYLIC+ACID'>QIC</scene></td></tr>
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NAD:NICOTINAMIDE-ADENINE-DINUCLEOTIDE'>NAD</scene>, <scene name='pdbligand=QIC:(1S,3R,4S,5R)-1,3,4,5-TETRAHYDROXYCYCLOHEXANECARBOXYLIC+ACID'>QIC</scene></td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[2nlo|2nlo]], [[3jyo|3jyo]], [[3jyq|3jyq]]</td></tr>
+
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[2nlo|2nlo]], [[3jyo|3jyo]], [[3jyq|3jyq]]</div></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">aroE, cg0504, Cgl0424 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=196627 CORGL])</td></tr>
+
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">aroE, cg0504, Cgl0424 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=196627 CORGL])</td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3jyp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3jyp OCA], [http://pdbe.org/3jyp PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3jyp RCSB], [http://www.ebi.ac.uk/pdbsum/3jyp PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3jyp ProSAT]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3jyp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3jyp OCA], [https://pdbe.org/3jyp PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3jyp RCSB], [https://www.ebi.ac.uk/pdbsum/3jyp PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3jyp ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/AROE_CORGL AROE_CORGL]] Catalyzes the NAD(+)-dependent oxidation of both quinate and shikimate to 3-dehydroquinate and 3-dehydroshikimate, respectively. Seems to play a key role in the quinate degradation pathway.<ref>PMID:18566515</ref>
+
[[https://www.uniprot.org/uniprot/AROE_CORGL AROE_CORGL]] Catalyzes the NAD(+)-dependent oxidation of both quinate and shikimate to 3-dehydroquinate and 3-dehydroshikimate, respectively. Seems to play a key role in the quinate degradation pathway.<ref>PMID:18566515</ref>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 22: Line 22:
==See Also==
==See Also==
-
*[[Shikimate dehydrogenase|Shikimate dehydrogenase]]
+
*[[Shikimate dehydrogenase 3D structures|Shikimate dehydrogenase 3D structures]]
== References ==
== References ==
<references/>
<references/>
Line 28: Line 28:
</StructureSection>
</StructureSection>
[[Category: Corgl]]
[[Category: Corgl]]
 +
[[Category: Large Structures]]
[[Category: Hoeppner, A]]
[[Category: Hoeppner, A]]
[[Category: Niefind, K]]
[[Category: Niefind, K]]

Revision as of 13:33, 4 May 2022

Quinate dehydrogenase from Corynebacterium glutamicum in complex with quinate and NADH

PDB ID 3jyp

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools