This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
3ljq
From Proteopedia
(Difference between revisions)
| Line 1: | Line 1: | ||
==Crystal Structure of the Glycosylasparaginase T152C apo-precursor== | ==Crystal Structure of the Glycosylasparaginase T152C apo-precursor== | ||
| - | <StructureSection load='3ljq' size='340' side='right' caption='[[3ljq]], [[Resolution|resolution]] 1.90Å' scene=''> | + | <StructureSection load='3ljq' size='340' side='right'caption='[[3ljq]], [[Resolution|resolution]] 1.90Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[3ljq]] is a 2 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[3ljq]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Atcc_13253 Atcc 13253]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3LJQ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3LJQ FirstGlance]. <br> |
| - | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GLY:GLYCINE'>GLY</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr> | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GLY:GLYCINE'>GLY</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr> |
| - | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[9gaa|9gaa]], [[9gac|9gac]], [[9gaf|9gaf]], [[1p4v|1p4v]], [[1p4k|1p4k]]</td></tr> | + | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[9gaa|9gaa]], [[9gac|9gac]], [[9gaf|9gaf]], [[1p4v|1p4v]], [[1p4k|1p4k]]</div></td></tr> |
| - | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">GA(1-295) ([ | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">GA(1-295) ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=238 ATCC 13253])</td></tr> |
| - | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/N(4)-(beta-N-acetylglucosaminyl)-L-asparaginase N(4)-(beta-N-acetylglucosaminyl)-L-asparaginase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.5.1.26 3.5.1.26] </span></td></tr> |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3ljq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ljq OCA], [https://pdbe.org/3ljq PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3ljq RCSB], [https://www.ebi.ac.uk/pdbsum/3ljq PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3ljq ProSAT]</span></td></tr> |
</table> | </table> | ||
== Function == | == Function == | ||
| - | [[ | + | [[https://www.uniprot.org/uniprot/ASPG_ELIMR ASPG_ELIMR]] Cleaves the GlcNAc-Asn bond which joins oligosaccharides to the peptide of asparagine-linked glycoproteins. Requires that the glycosylated asparagine moiety is not substituted on its N-(R1) and C- (R2) terminus. |
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
== Publication Abstract from PubMed == | == Publication Abstract from PubMed == | ||
| Line 23: | Line 23: | ||
==See Also== | ==See Also== | ||
| + | *[[Asparaginase 3D structures|Asparaginase 3D structures]] | ||
*[[Glycosylasparaginase|Glycosylasparaginase]] | *[[Glycosylasparaginase|Glycosylasparaginase]] | ||
== References == | == References == | ||
| Line 29: | Line 30: | ||
</StructureSection> | </StructureSection> | ||
[[Category: Atcc 13253]] | [[Category: Atcc 13253]] | ||
| + | [[Category: Large Structures]] | ||
[[Category: Guo, H C]] | [[Category: Guo, H C]] | ||
[[Category: Wang, Y]] | [[Category: Wang, Y]] | ||
Revision as of 12:35, 13 October 2021
Crystal Structure of the Glycosylasparaginase T152C apo-precursor
| |||||||||||
