1m55

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[[Image:1m55.gif|left|200px]]
[[Image:1m55.gif|left|200px]]
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{{Structure
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|PDB= 1m55 |SIZE=350|CAPTION= <scene name='initialview01'>1m55</scene>, resolution 1.40&Aring;
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The line below this paragraph, containing "STRUCTURE_1m55", creates the "Structure Box" on the page.
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|SITE=
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|LIGAND= <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene>
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{{STRUCTURE_1m55| PDB=1m55 | SCENE= }}
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|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1m55 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1m55 OCA], [http://www.ebi.ac.uk/pdbsum/1m55 PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1m55 RCSB]</span>
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'''Catalytic domain of the Adeno Associated Virus type 5 Rep protein'''
'''Catalytic domain of the Adeno Associated Virus type 5 Rep protein'''
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[[Category: Kotin, R M.]]
[[Category: Kotin, R M.]]
[[Category: Ronning, D R.]]
[[Category: Ronning, D R.]]
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[[Category: adeno-associated virus]]
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[[Category: Adeno-associated virus]]
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[[Category: endonuclease]]
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[[Category: Endonuclease]]
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[[Category: rep]]
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[[Category: Rep]]
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[[Category: rolling circle replication]]
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[[Category: Rolling circle replication]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sat May 3 00:38:39 2008''
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Mar 30 22:11:26 2008''
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Revision as of 21:38, 2 May 2008

Template:STRUCTURE 1m55

Catalytic domain of the Adeno Associated Virus type 5 Rep protein


Overview

Adeno-associated virus (AAV), unique among animal viruses in its ability to integrate into a specific chromosomal location, is a promising vector for human gene therapy. AAV Replication (Rep) protein is essential for viral replication and integration, and its amino terminal domain possesses site-specific DNA binding and endonuclease activities required for replication initiation and integration. This domain displays a novel endonuclease fold and demonstrates an unexpected structural relationship to other viral origin binding proteins such as the papillomavirus E1 protein and the SV40 T antigen. The active site, located at the bottom of a positively charged cleft, is formed by the spatial convergence of a divalent metal ion and two conserved sequence motifs that define the rolling circle replication superfamily.

About this Structure

1M55 is a Single protein structure of sequence from Adeno-associated virus - 5. Full crystallographic information is available from OCA.

Reference

Structural unity among viral origin binding proteins: crystal structure of the nuclease domain of adeno-associated virus Rep., Hickman AB, Ronning DR, Kotin RM, Dyda F, Mol Cell. 2002 Aug;10(2):327-37. PMID:12191478 Page seeded by OCA on Sat May 3 00:38:39 2008

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