3nev

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
==Crystal structure of YagE, a prophage protein from E. coli K12 in complex with KDGal==
==Crystal structure of YagE, a prophage protein from E. coli K12 in complex with KDGal==
-
<StructureSection load='3nev' size='340' side='right' caption='[[3nev]], [[Resolution|resolution]] 2.19&Aring;' scene=''>
+
<StructureSection load='3nev' size='340' side='right'caption='[[3nev]], [[Resolution|resolution]] 2.19&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[3nev]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Ecoli Ecoli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3NEV OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3NEV FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[3nev]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Ecoli Ecoli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3NEV OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3NEV FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=RSH:3-DEOXY-D-LYXO-HEXONIC+ACID'>RSH</scene></td></tr>
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=RSH:3-DEOXY-D-LYXO-HEXONIC+ACID'>RSH</scene></td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[2v8z|2v8z]], [[2v9d|2v9d]], [[3n2x|3n2x]]</td></tr>
+
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[2v8z|2v8z]], [[2v9d|2v9d]], [[3n2x|3n2x]]</div></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">b0268, JW0261, yagE ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=83333 ECOLI])</td></tr>
+
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">b0268, JW0261, yagE ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=83333 ECOLI])</td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3nev FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3nev OCA], [http://pdbe.org/3nev PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3nev RCSB], [http://www.ebi.ac.uk/pdbsum/3nev PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3nev ProSAT]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3nev FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3nev OCA], [https://pdbe.org/3nev PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3nev RCSB], [https://www.ebi.ac.uk/pdbsum/3nev PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3nev ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/YAGE_ECOLI YAGE_ECOLI]] Catalyzes the formation of 2-keto-3-deoxy-galactonate (KDGal) from pyruvate and glyceraldehyde. Overexpression leads to increased growth (over 2 hours) in the presence of the antibiotics norfloxacin, ampicillin and streptomycin.
+
[[https://www.uniprot.org/uniprot/YAGE_ECOLI YAGE_ECOLI]] Catalyzes the formation of 2-keto-3-deoxy-galactonate (KDGal) from pyruvate and glyceraldehyde. Overexpression leads to increased growth (over 2 hours) in the presence of the antibiotics norfloxacin, ampicillin and streptomycin.
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 25: Line 25:
</StructureSection>
</StructureSection>
[[Category: Ecoli]]
[[Category: Ecoli]]
 +
[[Category: Large Structures]]
[[Category: Bhaskar, V]]
[[Category: Bhaskar, V]]
[[Category: Krishnaswamy, S]]
[[Category: Krishnaswamy, S]]

Revision as of 07:00, 12 May 2022

Crystal structure of YagE, a prophage protein from E. coli K12 in complex with KDGal

PDB ID 3nev

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/3nev"
Personal tools