This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


4e1t

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
==X-ray crystal structure of the transmembrane beta-domain from invasin from Yersinia pseudotuberculosis==
==X-ray crystal structure of the transmembrane beta-domain from invasin from Yersinia pseudotuberculosis==
-
<StructureSection load='4e1t' size='340' side='right' caption='[[4e1t]], [[Resolution|resolution]] 2.26&Aring;' scene=''>
+
<StructureSection load='4e1t' size='340' side='right'caption='[[4e1t]], [[Resolution|resolution]] 2.26&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[4e1t]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/"bacillus_pseudotuberkulosis"_(sic)_pfeiffer_1889 "bacillus pseudotuberkulosis" (sic) pfeiffer 1889]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4E1T OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4E1T FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[4e1t]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Yersinia_pseudotuberculosis Yersinia pseudotuberculosis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4E1T OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4E1T FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=OLB:(2S)-2,3-DIHYDROXYPROPYL+(9Z)-OCTADEC-9-ENOATE'>OLB</scene>, <scene name='pdbligand=OLC:(2R)-2,3-DIHYDROXYPROPYL+(9Z)-OCTADEC-9-ENOATE'>OLC</scene></td></tr>
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=OLB:(2S)-2,3-DIHYDROXYPROPYL+(9Z)-OCTADEC-9-ENOATE'>OLB</scene>, <scene name='pdbligand=OLC:(2R)-2,3-DIHYDROXYPROPYL+(9Z)-OCTADEC-9-ENOATE'>OLC</scene></td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4e1s|4e1s]]</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4e1t FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4e1t OCA], [https://pdbe.org/4e1t PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4e1t RCSB], [https://www.ebi.ac.uk/pdbsum/4e1t PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4e1t ProSAT]</span></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">invasin, YPTB1668 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=633 "Bacillus pseudotuberkulosis" (sic) Pfeiffer 1889])</td></tr>
+
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4e1t FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4e1t OCA], [http://pdbe.org/4e1t PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4e1t RCSB], [http://www.ebi.ac.uk/pdbsum/4e1t PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4e1t ProSAT]</span></td></tr>
+
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/INVA_YERPS INVA_YERPS]] Invasin is a protein that allows enteric bacteria to penetrate cultured mammalian cells. The entry of invasin in the cell is mediated by binding several beta-1 chain integrins.
+
[[https://www.uniprot.org/uniprot/INVA_YERPS INVA_YERPS]] Invasin is a protein that allows enteric bacteria to penetrate cultured mammalian cells. The entry of invasin in the cell is mediated by binding several beta-1 chain integrins.
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 24: Line 22:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Barnard, T J]]
+
[[Category: Large Structures]]
-
[[Category: Buchanan, S K]]
+
[[Category: Yersinia pseudotuberculosis]]
-
[[Category: Cherezov, V]]
+
[[Category: Barnard TJ]]
-
[[Category: Dautin, N]]
+
[[Category: Buchanan SK]]
-
[[Category: Fairman, J W]]
+
[[Category: Cherezov V]]
-
[[Category: Finkelstein, A]]
+
[[Category: Dautin N]]
-
[[Category: Noinaj, N]]
+
[[Category: Fairman JW]]
-
[[Category: Przytycka, T M]]
+
[[Category: Finkelstein A]]
-
[[Category: Udho, E]]
+
[[Category: Noinaj N]]
-
[[Category: Wei, L]]
+
[[Category: Przytycka TM]]
-
[[Category: Wojtowicz, D]]
+
[[Category: Udho E]]
-
[[Category: Adhesin]]
+
[[Category: Wei L]]
-
[[Category: Cell adhesion]]
+
[[Category: Wojtowicz D]]
-
[[Category: Integrin]]
+
-
[[Category: Outer membrane beta barrel]]
+

Revision as of 06:45, 28 September 2022

X-ray crystal structure of the transmembrane beta-domain from invasin from Yersinia pseudotuberculosis

PDB ID 4e1t

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/4e1t"
Personal tools