This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
3c6f
From Proteopedia
(Difference between revisions)
| Line 3: | Line 3: | ||
<StructureSection load='3c6f' size='340' side='right' caption='[[3c6f]], [[Resolution|resolution]] 2.50Å' scene=''> | <StructureSection load='3c6f' size='340' side='right' caption='[[3c6f]], [[Resolution|resolution]] 2.50Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[3c6f]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/" | + | <table><tr><td colspan='2'>[[3c6f]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/"vibrio_subtilis"_ehrenberg_1835 "vibrio subtilis" ehrenberg 1835]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3C6F OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3C6F FirstGlance]. <br> |
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr> | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr> | ||
| - | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">yetF, BSU07140 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1423 " | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">yetF, BSU07140 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1423 "Vibrio subtilis" Ehrenberg 1835])</td></tr> |
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3c6f FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3c6f OCA], [http://pdbe.org/3c6f PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3c6f RCSB], [http://www.ebi.ac.uk/pdbsum/3c6f PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3c6f ProSAT], [http://www.topsan.org/Proteins/NYSGXRC/3c6f TOPSAN]</span></td></tr> | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3c6f FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3c6f OCA], [http://pdbe.org/3c6f PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3c6f RCSB], [http://www.ebi.ac.uk/pdbsum/3c6f PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3c6f ProSAT], [http://www.topsan.org/Proteins/NYSGXRC/3c6f TOPSAN]</span></td></tr> | ||
</table> | </table> | ||
| Line 12: | Line 12: | ||
Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
| - | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/c6/3c6f_consurf.spt"</scriptWhenChecked> | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/c6/3c6f_consurf.spt"</scriptWhenChecked> |
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
| Line 20: | Line 20: | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| - | [[Category: | + | [[Category: Vibrio subtilis ehrenberg 1835]] |
[[Category: Adams, J]] | [[Category: Adams, J]] | ||
[[Category: Almo, S C]] | [[Category: Almo, S C]] | ||
Revision as of 08:37, 14 November 2018
Crystal structure of protein Bsu07140 from Bacillus subtilis
| |||||||||||
Categories: Vibrio subtilis ehrenberg 1835 | Adams, J | Almo, S C | Burley, S K | Groshong, C | Min, T | Structural genomic | Patskovsky, Y | Sauder, J M | Wasserman, S R | Zhang, A | NYSGXRC, New York SGX Research Center for Structural Genomics | Predicted membrane protein | PSI, Protein structure initiative | Uncharacterized protein | Unknown function

