3lx5

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Current revision (16:26, 1 November 2023) (edit) (undo)
 
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==Crystal structure of mGMPPNP-bound NFeoB from S. thermophilus==
==Crystal structure of mGMPPNP-bound NFeoB from S. thermophilus==
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<StructureSection load='3lx5' size='340' side='right' caption='[[3lx5]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
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<StructureSection load='3lx5' size='340' side='right'caption='[[3lx5]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[3lx5]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Strt2 Strt2]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3LX5 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3LX5 FirstGlance]. <br>
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<table><tr><td colspan='2'>[[3lx5]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Streptococcus_thermophilus_LMG_18311 Streptococcus thermophilus LMG 18311]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3LX5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3LX5 FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=AGO:2-AMINO-9-(5-O-[(R)-HYDROXY{[(R)-HYDROXY(PHOSPHONOAMINO)PHOSPHORYL]OXY}PHOSPHORYL]-3-O-{[2-(METHYLAMINO)PHENYL]CARBONYL}-BETA-D-ERYTHRO-PENTOFURANOSYL-2-ULOSE)-1,9-DIHYDRO-6H-PURIN-6-ONE'>AGO</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9&#8491;</td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3lx8|3lx8]]</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=AGO:2-AMINO-9-(5-O-[(R)-HYDROXY{[(R)-HYDROXY(PHOSPHONOAMINO)PHOSPHORYL]OXY}PHOSPHORYL]-3-O-{[2-(METHYLAMINO)PHENYL]CARBONYL}-BETA-D-ERYTHRO-PENTOFURANOSYL-2-ULOSE)-1,9-DIHYDRO-6H-PURIN-6-ONE'>AGO</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">feoB, stu0608 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=264199 STRT2])</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3lx5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3lx5 OCA], [https://pdbe.org/3lx5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3lx5 RCSB], [https://www.ebi.ac.uk/pdbsum/3lx5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3lx5 ProSAT]</span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3lx5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3lx5 OCA], [http://pdbe.org/3lx5 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3lx5 RCSB], [http://www.ebi.ac.uk/pdbsum/3lx5 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3lx5 ProSAT]</span></td></tr>
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</table>
</table>
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== Function ==
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[https://www.uniprot.org/uniprot/Q5M586_STRT2 Q5M586_STRT2]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
<jmolCheckbox>
<jmolCheckbox>
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<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/lx/3lx5_consurf.spt"</scriptWhenChecked>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/lx/3lx5_consurf.spt"</scriptWhenChecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Strt2]]
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[[Category: Large Structures]]
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[[Category: Ash, M R]]
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[[Category: Streptococcus thermophilus LMG 18311]]
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[[Category: Clarke, R J]]
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[[Category: Ash MR]]
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[[Category: Guilfoyle, A]]
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[[Category: Clarke RJ]]
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[[Category: Guss, J M]]
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[[Category: Guilfoyle A]]
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[[Category: Jormakka, M]]
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[[Category: Guss JM]]
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[[Category: Maher, M J]]
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[[Category: Jormakka M]]
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[[Category: G protein]]
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[[Category: Maher MJ]]
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[[Category: Gtp-binding]]
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[[Category: Gtpase]]
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[[Category: Iron transport]]
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[[Category: Metal transport]]
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[[Category: Nucleotide-binding]]
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[[Category: Transmembrane]]
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Current revision

Crystal structure of mGMPPNP-bound NFeoB from S. thermophilus

PDB ID 3lx5

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