This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3e5f

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
==Crystal Structures of the SMK box (SAM-III) Riboswitch with Se-SAM==
==Crystal Structures of the SMK box (SAM-III) Riboswitch with Se-SAM==
-
<StructureSection load='3e5f' size='340' side='right' caption='[[3e5f]], [[Resolution|resolution]] 2.70&Aring;' scene=''>
+
<StructureSection load='3e5f' size='340' side='right'caption='[[3e5f]], [[Resolution|resolution]] 2.70&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[3e5f]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3E5F OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3E5F FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[3e5f]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3E5F OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=3E5F FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=EEM:[(3S)-3-AMINO-4-HYDROXY-4-OXO-BUTYL]-[[(2S,3S,4R,5R)-5-(6-AMINOPURIN-9-YL)-3,4-DIHYDROXY-OXOLAN-2-YL]METHYL]-METHYL-SELANIUM'>EEM</scene>, <scene name='pdbligand=SR:STRONTIUM+ION'>SR</scene></td></tr>
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EEM:[(3S)-3-AMINO-4-HYDROXY-4-OXO-BUTYL]-[[(2S,3S,4R,5R)-5-(6-AMINOPURIN-9-YL)-3,4-DIHYDROXY-OXOLAN-2-YL]METHYL]-METHYL-SELANIUM'>EEM</scene>, <scene name='pdbligand=SR:STRONTIUM+ION'>SR</scene></td></tr>
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=GTP:GUANOSINE-5-TRIPHOSPHATE'>GTP</scene></td></tr>
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=GTP:GUANOSINE-5-TRIPHOSPHATE'>GTP</scene></td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3e5c|3e5c]], [[3e5e|3e5e]]</td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3e5c|3e5c]], [[3e5e|3e5e]]</td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3e5f FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3e5f OCA], [http://pdbe.org/3e5f PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3e5f RCSB], [http://www.ebi.ac.uk/pdbsum/3e5f PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3e5f ProSAT]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=3e5f FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3e5f OCA], [http://pdbe.org/3e5f PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3e5f RCSB], [http://www.ebi.ac.uk/pdbsum/3e5f PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3e5f ProSAT]</span></td></tr>
</table>
</table>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
Line 20: Line 20:
==See Also==
==See Also==
-
*[[Riboswitch|Riboswitch]]
+
*[[Riboswitch 3D structures|Riboswitch 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
 +
[[Category: Large Structures]]
[[Category: Lu, C]]
[[Category: Lu, C]]
[[Category: Rna]]
[[Category: Rna]]
[[Category: Smk sam riboswitch shine-delgarno translation regulation]]
[[Category: Smk sam riboswitch shine-delgarno translation regulation]]

Revision as of 10:20, 9 September 2020

Crystal Structures of the SMK box (SAM-III) Riboswitch with Se-SAM

PDB ID 3e5f

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/3e5f"
Personal tools