1n61

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[[Image:1n61.gif|left|200px]]
[[Image:1n61.gif|left|200px]]
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{{Structure
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<!--
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|PDB= 1n61 |SIZE=350|CAPTION= <scene name='initialview01'>1n61</scene>, resolution 1.3&Aring;
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The line below this paragraph, containing "STRUCTURE_1n61", creates the "Structure Box" on the page.
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|SITE=
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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|LIGAND= <scene name='pdbligand=CUN:CU(I)-S-MO(IV)(=O)OH+CLUSTER'>CUN</scene>, <scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene>, <scene name='pdbligand=FES:FE2/S2+(INORGANIC)+CLUSTER'>FES</scene>, <scene name='pdbligand=MCN:PTERIN+CYTOSINE+DINUCLEOTIDE'>MCN</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene>
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Carbon-monoxide_dehydrogenase_(acceptor) Carbon-monoxide dehydrogenase (acceptor)], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.2.99.2 1.2.99.2] </span>
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or leave the SCENE parameter empty for the default display.
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|GENE=
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-->
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|DOMAIN=
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{{STRUCTURE_1n61| PDB=1n61 | SCENE= }}
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|RELATEDENTRY=[[1n5w|1N5W]], [[1n60|1N60]], [[1n62|1N62]], [[1n63|1N63]]
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|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1n61 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1n61 OCA], [http://www.ebi.ac.uk/pdbsum/1n61 PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1n61 RCSB]</span>
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}}
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'''Crystal Structure of the Cu,Mo-CO Dehydrogenase (CODH); Dithionite reduced state'''
'''Crystal Structure of the Cu,Mo-CO Dehydrogenase (CODH); Dithionite reduced state'''
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==Reference==
==Reference==
Catalysis at a dinuclear [CuSMo(==O)OH] cluster in a CO dehydrogenase resolved at 1.1-A resolution., Dobbek H, Gremer L, Kiefersauer R, Huber R, Meyer O, Proc Natl Acad Sci U S A. 2002 Dec 10;99(25):15971-6. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/12475995 12475995]
Catalysis at a dinuclear [CuSMo(==O)OH] cluster in a CO dehydrogenase resolved at 1.1-A resolution., Dobbek H, Gremer L, Kiefersauer R, Huber R, Meyer O, Proc Natl Acad Sci U S A. 2002 Dec 10;99(25):15971-6. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/12475995 12475995]
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[[Category: Carbon-monoxide dehydrogenase (acceptor)]]
 
[[Category: Oligotropha carboxidovorans]]
[[Category: Oligotropha carboxidovorans]]
[[Category: Protein complex]]
[[Category: Protein complex]]
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[[Category: Kiefersauer, R.]]
[[Category: Kiefersauer, R.]]
[[Category: Meyer, O.]]
[[Category: Meyer, O.]]
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[[Category: codh]]
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[[Category: Codh]]
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[[Category: copper]]
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[[Category: Copper]]
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[[Category: molybdenum]]
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[[Category: Molybdenum]]
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[[Category: molybdopterin]]
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[[Category: Molybdopterin]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sat May 3 02:08:17 2008''
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Mar 30 22:25:52 2008''
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Revision as of 23:08, 2 May 2008

Template:STRUCTURE 1n61

Crystal Structure of the Cu,Mo-CO Dehydrogenase (CODH); Dithionite reduced state


Overview

The CO dehydrogenase of the eubacterium Oligotropha carboxidovorans is a 277-kDa Mo- and Cu-containing iron-sulfur flavoprotein. Here, the enzyme's active site in the oxidized or reduced state, after inactivation with potassium cyanide or with n-butylisocyanide bound to the active site, has been reinvestigated by multiple wavelength anomalous dispersion measurements at atomic resolution, electron spin resonance spectroscopy, and chemical analyses. We present evidence for a dinuclear heterometal [CuSMoO)OH] cluster in the active site of the oxidized or reduced enzyme, which is prone to cyanolysis. The cluster is coordinated through interactions of the Mo with the dithiolate pyran ring of molybdopterin cytosine dinucleotide and of the Cu with the Sgamma of Cys-388, which is part of the active-site loop VAYRC(388)SFR. The previously reported active-site structure [Dobbek, H., Gremer, L., Meyer, O. & Huber, R. (1999) Proc. Natl. Acad. Sci. USA 96, 8884-8889] of an Mo with three oxygen ligands and an SeH-group bound to the Sgamma atom of Cys-388 could not be confirmed. The structure of CO dehydrogenase with the inhibitor n-butylisocyanide bound has led to a model for the catalytic mechanism of CO oxidation which involves a thiocarbonate-like intermediate state. The dinuclear [CuSMo(O)OH] cluster of CO dehydrogenase establishes a previously uncharacterized class of dinuclear molybdoenzymes containing the pterin cofactor.

About this Structure

1N61 is a Protein complex structure of sequences from Oligotropha carboxidovorans. Full crystallographic information is available from OCA.

Reference

Catalysis at a dinuclear [CuSMo(==O)OH] cluster in a CO dehydrogenase resolved at 1.1-A resolution., Dobbek H, Gremer L, Kiefersauer R, Huber R, Meyer O, Proc Natl Acad Sci U S A. 2002 Dec 10;99(25):15971-6. PMID:12475995 Page seeded by OCA on Sat May 3 02:08:17 2008

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