This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


Retinoid X receptor

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 27: Line 27:
**[[2q60]] – RXR LBD – ''Polyandrocarpa misakiensis''<br />
**[[2q60]] – RXR LBD – ''Polyandrocarpa misakiensis''<br />
**[[1by4]] – hRXR + DNA<br />
**[[1by4]] – hRXR + DNA<br />
-
**[[1g5y]] - hRXR LBD + retinoid<br />
+
**[[1g5y]], [[4zhs]] - hRXR LBD + retinoid<br />
**[[1dkf]] – mRXR LBD + mRAR LBD – mouse<br />
**[[1dkf]] – mRXR LBD + mRAR LBD – mouse<br />
**[[1dsz]] - hRXR LBD + hRAR LBD + DNA<br />
**[[1dsz]] - hRXR LBD + hRAR LBD + DNA<br />
Line 42: Line 42:
**[[3oap]] - hRXR LBD + 9-''cis'' retinoic acid + coactivator peptide<br />
**[[3oap]] - hRXR LBD + 9-''cis'' retinoic acid + coactivator peptide<br />
**[[3uvv]] - hRXR LBD + 9-''cis'' retinoic acid + thyronine + thyroid hormone receptor α<br />
**[[3uvv]] - hRXR LBD + 9-''cis'' retinoic acid + thyronine + thyroid hormone receptor α<br />
 +
**[[4zo1]] - hRXR LBD + coactivator peptide + thyroid hormone + thyroid hormone receptor β<br />
**[[3ozj]] - hRXR LBD + bigelovin + coactivator peptide<br />
**[[3ozj]] - hRXR LBD + bigelovin + coactivator peptide<br />
**[[3pcu]] - hRXR LBD + rutamarin + coactivator peptide<br />
**[[3pcu]] - hRXR LBD + rutamarin + coactivator peptide<br />
Line 51: Line 52:
**[[3kwy]] - hRXR LBD + triphenyltin + coactivator peptide<br />
**[[3kwy]] - hRXR LBD + triphenyltin + coactivator peptide<br />
**[[3e94]] - hRXR LBD + tributylin + coactivator peptide<br />
**[[3e94]] - hRXR LBD + tributylin + coactivator peptide<br />
-
**[[2p1t]], [[2p1u]], [[2p1v]] - hRXR LBD + retinoid + coactivator peptide<br />
+
**[[2p1t]], [[2p1u]], [[2p1v]], [[4rfw]], [[4rmc]], [[4rme]], [[4rmd]] - hRXR LBD + retinoid + coactivator peptide<br />
**[[4oc7]] - hRXR LBD + acrylic acid derivative + coactivator peptide<br />
**[[4oc7]] - hRXR LBD + acrylic acid derivative + coactivator peptide<br />
 +
**[[5ec9]] - hRXR LBD + benzofuran derivative + coactivator peptide<br />
**[[4poh]], [[4poj]], [[4pp3]], [[4pp5]] - hRXR LBD + trienoic acid derivative + coactivator peptide<br />
**[[4poh]], [[4poj]], [[4pp3]], [[4pp5]] - hRXR LBD + trienoic acid derivative + coactivator peptide<br />
**[[1xls]] - hRXR LBD (mutant) + orphan nuclear receptor NR1I3 + coactivator peptide<br />
**[[1xls]] - hRXR LBD (mutant) + orphan nuclear receptor NR1I3 + coactivator peptide<br />

Revision as of 08:48, 8 August 2016

Structure of human retinoid X receptor α ligand-binding domain complex with 9-cis retinoic acid (PDB entry 1fby)

Drag the structure with the mouse to rotate

3D structures of retinoid X receptor

Updated on 08-August-2016

References

  1. Dawson MI, Xia Z. The retinoid X receptors and their ligands. Biochim Biophys Acta. 2012 Jan;1821(1):21-56. doi: 10.1016/j.bbalip.2011.09.014. , Epub 2011 Oct 1. PMID:22020178 doi:http://dx.doi.org/10.1016/j.bbalip.2011.09.014
  2. Wu Y, Zhang X, Bardag-Gorce F, Robel RC, Aguilo J, Chen L, Zeng Y, Hwang K, French SW, Lu SC, Wan YJ. Retinoid X receptor alpha regulates glutathione homeostasis and xenobiotic detoxification processes in mouse liver. Mol Pharmacol. 2004 Mar;65(3):550-7. PMID:14978233 doi:http://dx.doi.org/10.1124/mol.65.3.550
  3. Wietrzych-Schindler M, Szyszka-Niagolov M, Ohta K, Endo Y, Perez E, de Lera AR, Chambon P, Krezel W. Retinoid x receptor gamma is implicated in docosahexaenoic acid modulation of despair behaviors and working memory in mice. Biol Psychiatry. 2011 Apr 15;69(8):788-94. doi: 10.1016/j.biopsych.2010.12.017., Epub 2011 Feb 21. PMID:21334601 doi:http://dx.doi.org/10.1016/j.biopsych.2010.12.017
  4. Natrajan MS, de la Fuente AG, Crawford AH, Linehan E, Nunez V, Johnson KR, Wu T, Fitzgerald DC, Ricote M, Bielekova B, Franklin RJ. Retinoid X receptor activation reverses age-related deficiencies in myelin debris phagocytosis and remyelination. Brain. 2015 Dec;138(Pt 12):3581-97. doi: 10.1093/brain/awv289. Epub 2015 Oct 12. PMID:26463675 doi:http://dx.doi.org/10.1093/brain/awv289
  5. Egea PF, Mitschler A, Rochel N, Ruff M, Chambon P, Moras D. Crystal structure of the human RXRalpha ligand-binding domain bound to its natural ligand: 9-cis retinoic acid. EMBO J. 2000 Jun 1;19(11):2592-601. PMID:10835357 doi:10.1093/emboj/19.11.2592

Proteopedia Page Contributors and Editors (what is this?)

Michal Harel, Alexander Berchansky, Joel L. Sussman

Personal tools