1ndy

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[[Image:1ndy.jpg|left|200px]]
[[Image:1ndy.jpg|left|200px]]
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{{Structure
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<!--
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|PDB= 1ndy |SIZE=350|CAPTION= <scene name='initialview01'>1ndy</scene>, resolution 2.&Aring;
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The line below this paragraph, containing "STRUCTURE_1ndy", creates the "Structure Box" on the page.
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|SITE=
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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|LIGAND= <scene name='pdbligand=FR3:1-((1R)-1-(HYDROXYMETHYL)-3-(1-NAPHTHYL)PROPYL)-1H-IMIDAZOLE-4-CARBOXAMIDE'>FR3</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene>
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Adenosine_deaminase Adenosine deaminase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.5.4.4 3.5.4.4] </span>
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or leave the SCENE parameter empty for the default display.
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|GENE=
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-->
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|DOMAIN=
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{{STRUCTURE_1ndy| PDB=1ndy | SCENE= }}
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|RELATEDENTRY=[[1ndv|1NDV]], [[1ndw|1NDW]], [[1ndz|1NDZ]]
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|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1ndy FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ndy OCA], [http://www.ebi.ac.uk/pdbsum/1ndy PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1ndy RCSB]</span>
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}}
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'''Crystal Structure of Adenosine Deaminase Complexed with FR230513'''
'''Crystal Structure of Adenosine Deaminase Complexed with FR230513'''
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[[Category: Single protein]]
[[Category: Single protein]]
[[Category: Kinoshita, T.]]
[[Category: Kinoshita, T.]]
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[[Category: sbdd]]
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[[Category: Sbdd]]
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[[Category: tim-barrel]]
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[[Category: Tim-barrel]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sat May 3 02:25:09 2008''
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Mar 30 22:29:06 2008''
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Revision as of 23:25, 2 May 2008

Template:STRUCTURE 1ndy

Crystal Structure of Adenosine Deaminase Complexed with FR230513


Overview

We disclose herein the rapid discovery of the first highly potent (Ki = 7.7 nM) non-nucleoside adenosine deaminase (ADA) inhibitor based on the rational hybridization of two structurally distinct leads. Two micromolar inhibitors were discovered by a parallel rational design and random screening program, and individual crystal structures of bovine ADA in complexation with these inhibitors revealed several unknown binding sites and distinct binding modes. Using this information as the starting point, highly effective lead hybridization was achieved in only two structure-based drug design iterations. The conceptual approach illustrated by this example promises to be broadly useful in the search for new chemical entities and can contribute greatly to improve the overall efficiency and speed of drug discovery.

About this Structure

1NDY is a Single protein structure of sequence from Bos taurus. Full crystallographic information is available from OCA.

Reference

A highly potent non-nucleoside adenosine deaminase inhibitor: efficient drug discovery by intentional lead hybridization., Terasaka T, Kinoshita T, Kuno M, Nakanishi I, J Am Chem Soc. 2004 Jan 14;126(1):34-5. PMID:14709046 Page seeded by OCA on Sat May 3 02:25:09 2008

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