4lub

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==X-ray structure of prephenate dehydratase from Streptococcus mutans==
==X-ray structure of prephenate dehydratase from Streptococcus mutans==
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<StructureSection load='4lub' size='340' side='right' caption='[[4lub]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
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<StructureSection load='4lub' size='340' side='right'caption='[[4lub]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[4lub]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Strmu Strmu]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4LUB OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4LUB FirstGlance]. <br>
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<table><tr><td colspan='2'>[[4lub]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Streptococcus_mutans_UA159 Streptococcus mutans UA159]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4LUB OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4LUB FirstGlance]. <br>
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</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">pheA, SMU_786 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=210007 STRMU])</td></tr>
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</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4lub FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4lub OCA], [https://pdbe.org/4lub PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4lub RCSB], [https://www.ebi.ac.uk/pdbsum/4lub PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4lub ProSAT]</span></td></tr>
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<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Prephenate_dehydratase Prephenate dehydratase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.2.1.51 4.2.1.51] </span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4lub FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4lub OCA], [http://pdbe.org/4lub PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4lub RCSB], [http://www.ebi.ac.uk/pdbsum/4lub PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4lub ProSAT]</span></td></tr>
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</table>
</table>
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== Function ==
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[https://www.uniprot.org/uniprot/Q8DUV6_STRMU Q8DUV6_STRMU]
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Prephenate dehydratase is a key enzyme of the biosynthesis of L-phenylalanine in the organisms that utilize shikimate pathway. Since this enzymatic pathway does not exist in mammals, prephenate dehydratase can provide a new drug targets for antibiotics or herbicide. Prephenate dehydratase is an allosteric enzyme regulated by its end product. The enzyme composed of two domains, catalytic PDT domain located near the N-terminal and regulatory ACT domain located near the C-terminal. The allosteric enzyme is suggested to have two different conformations. When the regulatory molecule, phenylalanine, is not bound to its ACT domain, the catalytic site of PDT domain maintain open (active) state conformation as Sa-PDT structure. And the open state of its catalytic site become closed (allosterically inhibited) state if the regulatory molecule is bound to its ACT domain as Ct-PDT structure. However, the X-ray structure of prephenate dehydratase from Streptococcus mutans (Sm-PDT) shows that the catalytic site of Sm-PDT has closed state conformation without phenylalanine molecule bound to its regulatory site. The structure suggests a possibility that the binding of phenylalanine in its regulatory site may not be the only prerequisite for the closed state conformation of Sm-PDT.
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X-ray structure of prephenate dehydratase from Streptococcus mutans.,Shin MH, Ku HK, Song JS, Choi S, Son SY, Yang HJ, Kim HD, Kim SK, Park IY, Lee SJ J Microbiol. 2014 Jun;52(6):490-5. doi: 10.1007/s12275-014-3645-8. Epub 2014 Mar , 7. PMID:24610334<ref>PMID:24610334</ref>
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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<div class="pdbe-citations 4lub" style="background-color:#fffaf0;"></div>
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== References ==
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<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Prephenate dehydratase]]
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[[Category: Large Structures]]
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[[Category: Strmu]]
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[[Category: Streptococcus mutans UA159]]
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[[Category: Choi, S]]
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[[Category: Choi S]]
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[[Category: Ku, H K]]
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[[Category: Ku HK]]
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[[Category: Shin, H H]]
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[[Category: Shin HH]]
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[[Category: Son, S Y]]
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[[Category: Son SY]]
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[[Category: Song, J S]]
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[[Category: Song JS]]
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[[Category: Dehydratase]]
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[[Category: Dehydration]]
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[[Category: Lyase]]
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Revision as of 10:32, 21 December 2022

X-ray structure of prephenate dehydratase from Streptococcus mutans

PDB ID 4lub

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