This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


4ljs

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (11:05, 14 December 2022) (edit) (undo)
 
Line 1: Line 1:
==The crystal structure of a periplasmic binding protein from Veillonella parvula DSM 2008==
==The crystal structure of a periplasmic binding protein from Veillonella parvula DSM 2008==
-
<StructureSection load='4ljs' size='340' side='right' caption='[[4ljs]], [[Resolution|resolution]] 2.32&Aring;' scene=''>
+
<StructureSection load='4ljs' size='340' side='right'caption='[[4ljs]], [[Resolution|resolution]] 2.32&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[4ljs]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Veipt Veipt]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4LJS OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4LJS FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[4ljs]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Veillonella_parvula_DSM_2008 Veillonella parvula DSM 2008]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4LJS OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4LJS FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
-
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4ljs FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4ljs OCA], [https://pdbe.org/4ljs PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4ljs RCSB], [https://www.ebi.ac.uk/pdbsum/4ljs PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4ljs ProSAT]</span></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">Vpar_0062 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=479436 VEIPT])</td></tr>
+
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4ljs FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4ljs OCA], [http://pdbe.org/4ljs PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4ljs RCSB], [http://www.ebi.ac.uk/pdbsum/4ljs PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4ljs ProSAT]</span></td></tr>
+
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/D1BQD8_VEIPT D1BQD8_VEIPT]
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Veipt]]
+
[[Category: Large Structures]]
-
[[Category: Chhor, G]]
+
[[Category: Veillonella parvula DSM 2008]]
-
[[Category: Endres, M]]
+
[[Category: Chhor G]]
-
[[Category: Joachimiak, A]]
+
[[Category: Endres M]]
-
[[Category: Structural genomic]]
+
[[Category: Joachimiak A]]
-
[[Category: Tan, K]]
+
[[Category: Tan K]]
-
[[Category: Mcsg]]
+
-
[[Category: PSI, Protein structure initiative]]
+
-
[[Category: Psi-biology]]
+
-
[[Category: Transport protein]]
+

Current revision

The crystal structure of a periplasmic binding protein from Veillonella parvula DSM 2008

PDB ID 4ljs

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools