This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3gnl

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (07:49, 16 March 2022) (edit) (undo)
 
Line 1: Line 1:
==Structure of uncharacterized protein (LMOf2365_1472) from Listeria monocytogenes serotype 4b==
==Structure of uncharacterized protein (LMOf2365_1472) from Listeria monocytogenes serotype 4b==
-
<StructureSection load='3gnl' size='340' side='right' caption='[[3gnl]], [[Resolution|resolution]] 1.50&Aring;' scene=''>
+
<StructureSection load='3gnl' size='340' side='right'caption='[[3gnl]]' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[3gnl]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Lismf Lismf]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GNL OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3GNL FirstGlance]. <br>
+
<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GNL OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3GNL FirstGlance]. <br>
-
</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
+
</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3gnl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3gnl OCA], [https://pdbe.org/3gnl PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3gnl RCSB], [https://www.ebi.ac.uk/pdbsum/3gnl PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3gnl ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/3gnl TOPSAN]</span></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">LMOf2365_1472 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=265669 LISMF])</td></tr>
+
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3gnl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3gnl OCA], [http://pdbe.org/3gnl PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3gnl RCSB], [http://www.ebi.ac.uk/pdbsum/3gnl PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3gnl ProSAT], [http://www.topsan.org/Proteins/NYSGXRC/3gnl TOPSAN]</span></td></tr>
+
</table>
</table>
== Evolutionary Conservation ==
== Evolutionary Conservation ==
Line 12: Line 10:
Check<jmol>
Check<jmol>
<jmolCheckbox>
<jmolCheckbox>
-
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gn/3gnl_consurf.spt"</scriptWhenChecked>
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gn/3gnl_consurf.spt"</scriptWhenChecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
Line 20: Line 18:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Lismf]]
+
[[Category: Large Structures]]
-
[[Category: Almo, S C]]
+
[[Category: Almo SC]]
-
[[Category: Burley, S K]]
+
[[Category: Burley SK]]
-
[[Category: Structural genomic]]
+
[[Category: Ramagopal UA]]
-
[[Category: Ramagopal, U A]]
+
[[Category: Toro R]]
-
[[Category: Toro, R]]
+
-
[[Category: NYSGXRC, New York SGX Research Center for Structural Genomics]]
+
-
[[Category: PSI, Protein structure initiative]]
+
-
[[Category: Uncharacterized protein]]
+
-
[[Category: Unknown function]]
+

Current revision

Structure of uncharacterized protein (LMOf2365_1472) from Listeria monocytogenes serotype 4b

PDB ID 3gnl

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools